Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS333B01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical pr...   262   1e-70
Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical pr...   253   7e-68
Z81050-9|CAB02858.2|  400|Caenorhabditis elegans Hypothetical pr...    30   0.87 
Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U23484-6|AAK93845.1|  641|Caenorhabditis elegans Pink (pten-indu...    28   4.7  
U41539-1|AAB52498.1|  246|Caenorhabditis elegans Carbonic anhydr...    27   8.1  
M77697-7|AAA27902.6|  903|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z81479-7|CAB03943.1|  435|Caenorhabditis elegans Hypothetical
           protein C34F6.8 protein.
          Length = 435

 Score =  262 bits (641), Expect = 1e-70
 Identities = 115/172 (66%), Positives = 136/172 (79%)
 Frame = +2

Query: 2   RYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQ 181
           +YDGRFKDIF+++++  Y+  F   KIWYEHRLIDD VAQA+K SGGFVWACKNYDGDVQ
Sbjct: 240 KYDGRFKDIFQDIYEKKYEADFKNNKIWYEHRLIDDQVAQALKSSGGFVWACKNYDGDVQ 299

Query: 182 SDIVAQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWT 361
           SDIVAQGYGSLG+M+SVLMCPDG+T+E+EAAHGTVTRHYR HQ+G  TSTNP+ASI+AWT
Sbjct: 300 SDIVAQGYGSLGLMSSVLMCPDGKTIEAEAAHGTVTRHYREHQKGNSTSTNPIASIFAWT 359

Query: 362 RGLAHRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHGLANTKEG 517
           RGL HR  LD               C++ ++ GKMTKDL ICIHG   TK+G
Sbjct: 360 RGLHHRGVLDNNEALKTFSLTLEKACIDTVEEGKMTKDLSICIHG---TKKG 408


>Z68343-3|CAA92778.1|  412|Caenorhabditis elegans Hypothetical
           protein F59B8.2 protein.
          Length = 412

 Score =  253 bits (619), Expect = 7e-68
 Identities = 112/165 (67%), Positives = 134/165 (81%)
 Frame = +2

Query: 2   RYDGRFKDIFEEVFQSDYKTKFDEAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQ 181
           +YDGRFKDIF E++  +Y+ +F  A IWYEHRLIDDMVAQA+K  GGFVWACKNYDGDVQ
Sbjct: 218 KYDGRFKDIFAEIYP-EYEAEFKAAGIWYEHRLIDDMVAQAMKSDGGFVWACKNYDGDVQ 276

Query: 182 SDIVAQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQQGKPTSTNPVASIYAWT 361
           SD VAQGYGSLG+MTSVL+CPDG+TVE+EAAHGTVTRHYRMHQ+G+ TSTNP+ASI+AW+
Sbjct: 277 SDSVAQGYGSLGLMTSVLVCPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWS 336

Query: 362 RGLAHRAKLDGTPXXXXXXXXXXXXCVECIDSGKMTKDLVICIHG 496
           RGLAHRA LD               C+E +++G +TKDL IC+ G
Sbjct: 337 RGLAHRATLDKNSALETFANNLEAVCIETMEAGFLTKDLAICVKG 381


>Z81050-9|CAB02858.2|  400|Caenorhabditis elegans Hypothetical
           protein C50B6.11 protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 8   DGRFKDIFEEVFQSDYKTKFDEAKIWYEHRL 100
           + +F +I+E  FQ+ + T FD   +W  +R+
Sbjct: 162 NSKFAEIYESSFQNVFLTLFDNGTVWVNYRV 192


>Z71266-7|CAA95845.1|  987|Caenorhabditis elegans Hypothetical
           protein R06C7.8 protein.
          Length = 987

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 14  RFKDIFEEVFQSDYKTKFDEAKIWYEHRLID 106
           ++KD F E    DY+ + D   ++ +H++ID
Sbjct: 228 KWKDTFGEDVDDDYRKRKDSGVVFVKHQVID 258


>U23484-6|AAK93845.1|  641|Caenorhabditis elegans Pink (pten-induced
           kinase) homologprotein 1 protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +2

Query: 35  EVFQSDYKTKFDEAKIWYEHRLIDDMVAQAIKGSGGFVWACKNYDGDVQSDIVAQGYGSL 214
           +V Q D K+  D   + Y+    DD + Q +    G   AC N+  D +SD V+ G  + 
Sbjct: 333 KVAQRDMKS--DNILLEYD---FDDEIPQLVVADFGCALACDNWQVDYESDEVSLGGNAK 387

Query: 215 GMMTSVLMCPDGRTVE 262
                +     G+ V+
Sbjct: 388 TKAPEIATAVPGKNVK 403


>U41539-1|AAB52498.1|  246|Caenorhabditis elegans Carbonic anhydrase
           protein 3 protein.
          Length = 246

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 161 NYDGDVQSDIVAQGYGSLGMMTSVLMCPDGRTVESEAAHGTVTRHYRMHQ 310
           NYD  +Q DIV  G+       SV M P+ R+   E   G + + YR+ Q
Sbjct: 47  NYDHPIQGDIVNNGH-------SVQMTPELRSEHPEIYGGGLDQVYRLVQ 89


>M77697-7|AAA27902.6|  903|Caenorhabditis elegans Hypothetical
           protein B0303.11 protein.
          Length = 903

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 203 NPEQQYRTAHLRRSSCRPKQSHLIP**PVPPCRQLND 93
           N EQ+   A LR+        H++P    PPC+Q  D
Sbjct: 763 NEEQKNMAAILRKFHIDSSDLHILPEFSKPPCKQTYD 799


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,630
Number of Sequences: 27780
Number of extensions: 256870
Number of successful extensions: 563
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)