Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332H12f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens ...    33   0.80 
BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.        30   4.3  
AK128728-1|BAC87593.1|  441|Homo sapiens EC 2.4.99.1).  protein.       30   5.7  
AK127221-1|BAC86888.1|  441|Homo sapiens protein ( Homo sapiens ...    29   7.5  
AC007228-4|AAD23609.1|  559|Homo sapiens BC37295_3 protein.            29   9.9  

>AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35107 fis, clone PLACE6006871, moderately
           similar to SUPPRESSOR PROTEIN SRP40. ).
          Length = 258

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 31/117 (26%), Positives = 50/117 (42%)
 Frame = -2

Query: 511 IPSS*LHSSRAPYSGDAKDSGDITMAGGKPSAEDDVTSEELSSSIRSGKPPLLDQRRLMS 332
           IPSS   SS +P S  +  S   + +   PS+    +S   SSS  S   P        S
Sbjct: 55  IPSS-SSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSS 113

Query: 331 KSASYAPASVITEGHPPT*AFTSLFSRTKLSKRVSTDIHHSSARPFKANDTLSTFST 161
            S+S + +S  +   P     +S  S +  S   S+    SS+ P  ++ + S+ S+
Sbjct: 114 SSSSPSSSSSSSSSSPS----SSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSS 166



 Score = 29.9 bits (64), Expect = 5.7
 Identities = 29/115 (25%), Positives = 49/115 (42%)
 Frame = -2

Query: 505 SS*LHSSRAPYSGDAKDSGDITMAGGKPSAEDDVTSEELSSSIRSGKPPLLDQRRLMSKS 326
           SS   SS +P S  +  S   + +   PS+    +S   SSS  S   P        S S
Sbjct: 109 SSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS---PSSSSSSSSSSS 165

Query: 325 ASYAPASVITEGHPPT*AFTSLFSRTKLSKRVSTDIHHSSARPFKANDTLSTFST 161
           +S + +S  + G  P+ + +S  S +      S+     S+ P  ++ + S+ ST
Sbjct: 166 SSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPST 220


>BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.
          Length = 257

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 31/117 (26%), Positives = 51/117 (43%)
 Frame = -2

Query: 511 IPSS*LHSSRAPYSGDAKDSGDITMAGGKPSAEDDVTSEELSSSIRSGKPPLLDQRRLMS 332
           IPSS   SS +P S  +  S   + +   PS+    +S   SSS  S  P         S
Sbjct: 55  IPSS-SSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSP---SSSNSSS 110

Query: 331 KSASYAPASVITEGHPPT*AFTSLFSRTKLSKRVSTDIHHSSARPFKANDTLSTFST 161
            S+S +P+S  +     +   +S  S +  S   S+    SS+ P  ++ + S+ S+
Sbjct: 111 SSSSSSPSS--SSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSS 165



 Score = 29.9 bits (64), Expect = 5.7
 Identities = 29/115 (25%), Positives = 49/115 (42%)
 Frame = -2

Query: 505 SS*LHSSRAPYSGDAKDSGDITMAGGKPSAEDDVTSEELSSSIRSGKPPLLDQRRLMSKS 326
           SS   SS +P S  +  S   + +   PS+    +S   SSS  S   P        S S
Sbjct: 108 SSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS---PSSSSSSSSSSS 164

Query: 325 ASYAPASVITEGHPPT*AFTSLFSRTKLSKRVSTDIHHSSARPFKANDTLSTFST 161
           +S + +S  + G  P+ + +S  S +      S+     S+ P  ++ + S+ ST
Sbjct: 165 SSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPST 219


>AK128728-1|BAC87593.1|  441|Homo sapiens EC 2.4.99.1).  protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 469 GDAKDSGDITMAGGKPSAEDDVTSEELSSSIRSGKPPLLDQRRLMSKSASYAPASVITEG 290
           G +K+ G    AG    +     +E ++S++R G P     RRL+ +  +Y PA + +  
Sbjct: 15  GYSKEHGHTGSAGEAFLSTIQKAAEVVASAMRPG-PESPSTRRLLPRGDTYQPAMMPSAS 73

Query: 289 H-PPT 278
           H PPT
Sbjct: 74  HGPPT 78


>AK127221-1|BAC86888.1|  441|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45288 fis, clone BRHIP3002141. ).
          Length = 441

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 469 GDAKDSGDITMAGGKPSAEDDVTSEELSSSIRSGKPPLLDQRRLMSKSASYAPASVITEG 290
           G +K+ G    AG    +     +E ++S++R G P     RRL+ +  +Y PA + +  
Sbjct: 15  GYSKEHGRTGSAGEAFLSTIQKAAEVVASAMRPG-PESPSTRRLLPRGDTYQPAMMPSAS 73

Query: 289 H-PPT 278
           H PPT
Sbjct: 74  HGPPT 78


>AC007228-4|AAD23609.1|  559|Homo sapiens BC37295_3 protein.
          Length = 559

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
 Frame = -2

Query: 379 IRSGKPPLL--DQRRLMSKSASYAPASVITEGHPPT*AFTSLFSRTKLSKRVSTDIHHSS 206
           + +G+ P    D   L S+SAS A    I  G  P        + T++S        H+ 
Sbjct: 321 VHTGEKPYTCQDCGALFSQSASLAEHRRIHTGEKPYACGQCAKAFTQVSHLTQHQRTHTG 380

Query: 205 ARPFKANDTLSTFSTLIHLLVLKL 134
            RP+  +D    FS   HLL  +L
Sbjct: 381 ERPYPCHDCGKRFSNRSHLLQHRL 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,117,789
Number of Sequences: 237096
Number of extensions: 1416531
Number of successful extensions: 4170
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4168
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)