Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332H08f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 258 4e-69
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 258 4e-69
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 258 4e-69
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 258 4e-69
X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal prot... 161 5e-40
AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p pro... 40 0.002
AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA... 40 0.002
AY058781-1|AAL14010.1| 585|Drosophila melanogaster SD07191p pro... 30 2.2
AE014296-3712|AAF51856.1| 585|Drosophila melanogaster CG11238-P... 30 2.2
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 28 8.8
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 258 bits (631), Expect = 4e-69
Identities = 123/135 (91%), Positives = 130/135 (96%)
Frame = +2
Query: 2 NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3 NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62
Query: 182 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 361
TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63 TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122
Query: 362 SIHHARILIRQRHIR 406
SIHHAR+LIRQRHIR
Sbjct: 123 SIHHARVLIRQRHIR 137
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 258 bits (631), Expect = 4e-69
Identities = 123/135 (91%), Positives = 130/135 (96%)
Frame = +2
Query: 2 NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3 NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62
Query: 182 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 361
TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63 TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122
Query: 362 SIHHARILIRQRHIR 406
SIHHAR+LIRQRHIR
Sbjct: 123 SIHHARVLIRQRHIR 137
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 258 bits (631), Expect = 4e-69
Identities = 123/135 (91%), Positives = 130/135 (96%)
Frame = +2
Query: 2 NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3 NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62
Query: 182 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 361
TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63 TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122
Query: 362 SIHHARILIRQRHIR 406
SIHHAR+LIRQRHIR
Sbjct: 123 SIHHARVLIRQRHIR 137
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 258 bits (631), Expect = 4e-69
Identities = 123/135 (91%), Positives = 130/135 (96%)
Frame = +2
Query: 2 NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3 NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62
Query: 182 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 361
TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63 TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122
Query: 362 SIHHARILIRQRHIR 406
SIHHAR+LIRQRHIR
Sbjct: 123 SIHHARVLIRQRHIR 137
>X69677-1|CAB41492.1| 197|Drosophila melanogaster ribosomal protein
protein.
Length = 197
Score = 161 bits (391), Expect = 5e-40
Identities = 86/132 (65%), Positives = 99/132 (75%)
Frame = +2
Query: 2 NNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 181
N R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+ R V VKY LA+IRK ARELL
Sbjct: 3 NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARELL 61
Query: 182 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 361
TL+EKD KRLF+G +L+RRLVRIGVL + + G + L +AGLAK
Sbjct: 62 TLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGLAK 120
Query: 362 SIHHARILIRQR 397
SIHHAR+LIRQR
Sbjct: 121 SIHHARVLIRQR 132
>AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p
protein.
Length = 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/110 (22%), Positives = 51/110 (46%)
Frame = +2
Query: 77 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGV 256
+E KI+ + ++ + + + IR+ A + L+ +P + LL +L +GV
Sbjct: 28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87
Query: 257 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 406
++ Q+ L+ + F RRL + K +++ + A LI H+R
Sbjct: 88 SND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVR 136
>AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA
protein.
Length = 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/110 (22%), Positives = 51/110 (46%)
Frame = +2
Query: 77 QELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGV 256
+E KI+ + ++ + + + IR+ A + L+ +P + LL +L +GV
Sbjct: 28 KENKILRRFHIQKREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGV 87
Query: 257 LDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIR 406
++ Q+ L+ + F RRL + K +++ + A LI H+R
Sbjct: 88 SND-QLTLETAAKISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVR 136
>AY058781-1|AAL14010.1| 585|Drosophila melanogaster SD07191p
protein.
Length = 585
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = -2
Query: 409 LPNMPL---PDQNSGMMDGLRQASFEHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSN 248
LP+ P+ P + G + L E+ RLQ LQE LNLQT+ EF +Q S
Sbjct: 399 LPSNPIDSPPQEAEGTLQ-LSTLRQENERLQRELQEARAELNLQTRRASEFEQQLLQLSE 457
Query: 247 TNQ 239
T++
Sbjct: 458 TSR 460
>AE014296-3712|AAF51856.1| 585|Drosophila melanogaster CG11238-PA
protein.
Length = 585
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = -2
Query: 409 LPNMPL---PDQNSGMMDGLRQASFEHLRLQTTLQEV---LNLQTKHIIEFHLFFIQYSN 248
LP+ P+ P + G + L E+ RLQ LQE LNLQT+ EF +Q S
Sbjct: 399 LPSNPIDSPPQEAEGTLQ-LSTLRQENERLQRELQEARAELNLQTRRASEFEQQLLQLSE 457
Query: 247 TNQ 239
T++
Sbjct: 458 TSR 460
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 424 LLLKILPNMPLPDQNSGMMDGLRQASFEHLRLQTTLQEVLNLQTKHIIEFHLFFIQYSN 248
LL+++ + PLP NSG + +QA H + V N + K +++ L +Q+ +
Sbjct: 1095 LLMRL--SQPLPASNSGRANLFQQAVPHHKDVHPKASSVYNPRIKEVLQVLLQALQFKH 1151
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,978,915
Number of Sequences: 53049
Number of extensions: 455629
Number of successful extensions: 1166
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -