Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332H07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011413-1|AAR96205.1|  350|Drosophila melanogaster AT18092p pro...    29   5.1  
BT003280-1|AAO25037.1|  316|Drosophila melanogaster LD06393p pro...    29   5.1  
AY051887-1|AAK93311.1|  782|Drosophila melanogaster LD37409p pro...    29   5.1  
AE014297-546|AAN13356.1|  739|Drosophila melanogaster CG1104-PB,...    29   5.1  
AE014297-545|AAF54073.1|  782|Drosophila melanogaster CG1104-PA,...    29   5.1  
AE014296-1988|AAN11878.1|  350|Drosophila melanogaster CG6084-PB...    29   5.1  
AE014296-1987|AAF50039.2|  316|Drosophila melanogaster CG6084-PA...    29   5.1  
M20239-1|AAA28865.1|  155|Drosophila melanogaster protein ( D.me...    28   6.7  

>BT011413-1|AAR96205.1|  350|Drosophila melanogaster AT18092p
           protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 368 LLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFIPS 514
           L+ S  E     L   Y D   YL+ + +  +EG DLFP D + K + S
Sbjct: 123 LVKSALENTLSSLKLKYLDL--YLIHWPMGYKEGCDLFPTDKDGKTLYS 169


>BT003280-1|AAO25037.1|  316|Drosophila melanogaster LD06393p
           protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 368 LLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFIPS 514
           L+ S  E     L   Y D   YL+ + +  +EG DLFP D + K + S
Sbjct: 89  LVKSALENTLSSLKLKYLDL--YLIHWPMGYKEGCDLFPTDKDGKTLYS 135


>AY051887-1|AAK93311.1|  782|Drosophila melanogaster LD37409p
           protein.
          Length = 782

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 350 LAKSVQLLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFI 508
           LA++ +L  +  +TN +Q     +DR + LL      ++G  LFP+D++ + +
Sbjct: 524 LARAQELFEATPQTNRRQTHAAIQDRINTLLIDIRLYEKGLKLFPQDTQTQLV 576


>AE014297-546|AAN13356.1|  739|Drosophila melanogaster CG1104-PB,
           isoform B protein.
          Length = 739

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 350 LAKSVQLLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFI 508
           LA++ +L  +  +TN +Q     +DR + LL      ++G  LFP+D++ + +
Sbjct: 481 LARAQELFEATPQTNRRQTHAAIQDRINTLLIDIRLYEKGLKLFPQDTQTQLV 533


>AE014297-545|AAF54073.1|  782|Drosophila melanogaster CG1104-PA,
           isoform A protein.
          Length = 782

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 350 LAKSVQLLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFI 508
           LA++ +L  +  +TN +Q     +DR + LL      ++G  LFP+D++ + +
Sbjct: 524 LARAQELFEATPQTNRRQTHAAIQDRINTLLIDIRLYEKGLKLFPQDTQTQLV 576


>AE014296-1988|AAN11878.1|  350|Drosophila melanogaster CG6084-PB,
           isoform B protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 368 LLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFIPS 514
           L+ S  E     L   Y D   YL+ + +  +EG DLFP D + K + S
Sbjct: 123 LVKSALENTLSSLKLKYLDL--YLIHWPMGYKEGCDLFPTDKDGKTLYS 169


>AE014296-1987|AAF50039.2|  316|Drosophila melanogaster CG6084-PA,
           isoform A protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 368 LLSSFSETNEQQLFFIYRDR*SYLLQYKLNIQEGDDLFPKDSENKFIPS 514
           L+ S  E     L   Y D   YL+ + +  +EG DLFP D + K + S
Sbjct: 89  LVKSALENTLSSLKLKYLDL--YLIHWPMGYKEGCDLFPTDKDGKTLYS 135


>M20239-1|AAA28865.1|  155|Drosophila melanogaster protein (
           D.melanogaster RPII215gene encoding RNA polymerase II
           subunit, 5' end; P elementinsertion. ).
          Length = 155

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 178 QLVYNKINIYPMTHPQCKHALTNCL 104
           Q  Y+  N  P T   CKH L+ CL
Sbjct: 14  QTQYDTQNTIPFTRTYCKHTLSGCL 38


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,743,422
Number of Sequences: 53049
Number of extensions: 408748
Number of successful extensions: 1005
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)