Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332H06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69150-1|CAB56794.1|  152|Homo sapiens ribosomal protein S18 pro...   242   6e-64
BC106063-1|AAI06064.1|  152|Homo sapiens ribosomal protein S18 p...   242   6e-64
BC101788-1|AAI01789.1|  152|Homo sapiens ribosomal protein S18 p...   242   6e-64
BC101786-1|AAI01787.1|  152|Homo sapiens ribosomal protein S18 p...   242   6e-64
AL844527-17|CAI41848.1|  152|Homo sapiens ribosomal protein S18 ...   242   6e-64
AL713971-5|CAI17656.1|  152|Homo sapiens ribosomal protein S18 p...   242   6e-64
AL662827-19|CAI17530.1|  152|Homo sapiens ribosomal protein S18 ...   242   6e-64
AL662820-19|CAI18127.1|  152|Homo sapiens ribosomal protein S18 ...   242   6e-64
AL645940-16|CAI18076.1|  152|Homo sapiens ribosomal protein S18 ...   242   6e-64
AL031228-3|CAA20231.1|  152|Homo sapiens ribosomal protein S18 p...   242   6e-64
AL031228-2|CAI95617.1|   82|Homo sapiens ribosomal protein S18 p...   128   1e-29
BC071678-1|AAH71678.1|   74|Homo sapiens LOC645958 protein protein.   101   2e-21
BX248408-4|CAM26259.1|   34|Homo sapiens ribosomal protein S18 p...    60   5e-09
AY536376-1|AAT66049.1|   34|Homo sapiens rhabdomyosarcoma antige...    60   5e-09

>X69150-1|CAB56794.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>BC106063-1|AAI06064.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>BC101788-1|AAI01789.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>BC101786-1|AAI01787.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL844527-17|CAI41848.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL713971-5|CAI17656.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL662827-19|CAI17530.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL662820-19|CAI18127.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL645940-16|CAI18076.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL031228-3|CAA20231.1|  152|Homo sapiens ribosomal protein S18
           protein.
          Length = 152

 Score =  242 bits (592), Expect = 6e-64
 Identities = 106/133 (79%), Positives = 126/133 (94%)
 Frame = +3

Query: 3   LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECTEE 182
           LVIP+KFQHILR++NTNIDG+RK+ FA+TAIKGVGRRY+++VL+KADIDL KRAGE TE+
Sbjct: 3   LVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTED 62

Query: 183 EVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRG 362
           EVE++ITIM NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG
Sbjct: 63  EVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRG 122

Query: 363 MRHYWGLRVRGQH 401
           +RH+WGLRVRGQH
Sbjct: 123 LRHFWGLRVRGQH 135


>AL031228-2|CAI95617.1|   82|Homo sapiens ribosomal protein S18
           protein.
          Length = 82

 Score =  128 bits (309), Expect = 1e-29
 Identities = 54/65 (83%), Positives = 61/65 (93%)
 Frame = +3

Query: 207 MSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLR 386
           M NPRQYKIPDWFLNRQKD+ DGKYSQ+ ++ LD+KLREDLERLKKIRAHRG+RH+WGLR
Sbjct: 1   MQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR 60

Query: 387 VRGQH 401
           VRGQH
Sbjct: 61  VRGQH 65


>BC071678-1|AAH71678.1|   74|Homo sapiens LOC645958 protein protein.
          Length = 74

 Score =  101 bits (242), Expect = 2e-21
 Identities = 43/57 (75%), Positives = 51/57 (89%)
 Frame = +3

Query: 231 IPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRVRGQH 401
           +P WFLNRQKD+ DGKYSQ+ ++ LD+KL EDLERLKKIRA RG+RH+WGLRVRGQH
Sbjct: 1   MPAWFLNRQKDVKDGKYSQVLANGLDNKLCEDLERLKKIRARRGLRHFWGLRVRGQH 57


>BX248408-4|CAM26259.1|   34|Homo sapiens ribosomal protein S18
          protein.
          Length = 34

 Score = 60.1 bits (139), Expect = 5e-09
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3  LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIK 98
          LVIP+KFQHILR++NTNIDG+RK+ FA+TAIK
Sbjct: 3  LVIPEKFQHILRVLNTNIDGRRKIAFAITAIK 34


>AY536376-1|AAT66049.1|   34|Homo sapiens rhabdomyosarcoma antigen
          MU-RMS-40.21 protein.
          Length = 34

 Score = 60.1 bits (139), Expect = 5e-09
 Identities = 25/32 (78%), Positives = 31/32 (96%)
 Frame = +3

Query: 3  LVIPDKFQHILRIMNTNIDGKRKVMFAMTAIK 98
          LVIP+KFQHILR++NTNIDG+RK+ FA+TAIK
Sbjct: 3  LVIPEKFQHILRVLNTNIDGRRKIAFAITAIK 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,915,114
Number of Sequences: 237096
Number of extensions: 1449907
Number of successful extensions: 6723
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6723
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)