BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332H02f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF065522-1|ABK59322.1| 255|Anopheles gambiae beta carbonic anhy... 25 2.0
AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding pr... 24 3.6
AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding pr... 24 3.6
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 23 8.2
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 23 8.2
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 23 8.2
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 23 8.2
AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate phospho... 23 8.2
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 8.2
>EF065522-1|ABK59322.1| 255|Anopheles gambiae beta carbonic
anhydrase protein.
Length = 255
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 333 LDKDTVFSNRLPFDKIDVYDEKNKNINIE 419
LDK +FS+ P K Y + N IE
Sbjct: 153 LDKPLIFSSETPLRKFVAYIDPENNFAIE 181
>AY146752-1|AAO12067.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP35 protein.
Length = 277
Score = 23.8 bits (49), Expect = 3.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -2
Query: 283 VPRNCDCEEPVRPLDCAAAVPPPTNGDFC 197
VP DC+ R C +P NG+ C
Sbjct: 95 VPATEDCDNAKRTERCLVYLPQECNGEPC 123
>AY146751-1|AAO12066.1| 277|Anopheles gambiae odorant-binding
protein AgamOBP36 protein.
Length = 277
Score = 23.8 bits (49), Expect = 3.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -2
Query: 283 VPRNCDCEEPVRPLDCAAAVPPPTNGDFC 197
VP DC+ R C +P NG+ C
Sbjct: 95 VPATEDCDNAKRTERCLVNLPQECNGEPC 123
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 209 ICGRGNCSCTIKWS 250
IC G CSC WS
Sbjct: 1 ICTCGTCSCFDSWS 14
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 209 ICGRGNCSCTIKWS 250
IC G CSC WS
Sbjct: 1 ICTCGTCSCFDSWS 14
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 209 ICGRGNCSCTIKWS 250
IC G CSC WS
Sbjct: 1 ICTCGTCSCFDSWS 14
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 209 ICGRGNCSCTIKWS 250
IC G CSC WS
Sbjct: 1 ICTCGTCSCFDSWS 14
>AY214334-1|AAP69612.1| 519|Anopheles gambiae nicotinate
phosphoribosyltransferase-like protein protein.
Length = 519
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 8 RIRDRFHLDWFAK 46
RI +RF L WF+K
Sbjct: 312 RIAERFKLPWFSK 324
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 22.6 bits (46), Expect = 8.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 209 ICGRGNCSCTIKWS 250
IC G CSC WS
Sbjct: 577 ICTCGTCSCFDSWS 590
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,418
Number of Sequences: 2352
Number of extensions: 10965
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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