Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332G11f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 40 0.001
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 38 0.004
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 36 0.020
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 36 0.026
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 34 0.060
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 34 0.060
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 34 0.060
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 34 0.080
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 33 0.11
03_01_0249 - 1935355-1935827,1936129-1936330 32 0.24
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 32 0.32
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 31 0.74
01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,836... 30 1.3
03_05_0468 - 24630701-24631399 28 4.0
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 28 5.2
11_07_0003 - 27182551-27183054 27 6.9
09_02_0431 - 9327167-9327226,9327347-9327474,9327594-9327709,932... 27 6.9
09_02_0278 + 6691685-6692188 27 6.9
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 27 6.9
02_05_0600 - 30273080-30274692,30274709-30274949 27 6.9
12_02_0157 - 14547645-14547935 27 9.1
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 27 9.1
04_04_0451 - 25323178-25323241,25323614-25323741,25324533-253246... 27 9.1
03_02_0104 + 5645285-5645677,5645990-5646034,5646225-5646454,564... 27 9.1
03_02_0103 + 5640652-5641029,5641458-5641693,5642292-5642367,564... 27 9.1
02_05_0160 - 26382377-26382874 27 9.1
02_05_0061 + 25506648-25509399,25509564-25509901,25510392-255105... 27 9.1
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 27 9.1
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 185 DNRISSENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 337
D R ++ P F PFGQ+PVL+ + +S AI RY+ KY GA+
Sbjct: 39 DLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 212 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 319
PE + PFG++PVLE QS AI RY+ RKY
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 35.9 bits (79), Expect = 0.020
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Frame = +2
Query: 122 PVKALGESQ-----RLLLAYG--GQEFE----DNRISSENWPEFKPKTPFGQMPVLEIDG 268
PVK G +Q R+LL G E+E D + PE + PFGQ+P + DG
Sbjct: 3 PVKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQ-DG 61
Query: 269 KQYA-QSTAICRYLGRKY 319
Y +S AI +Y+ RKY
Sbjct: 62 DLYLFESRAIGKYILRKY 79
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 35.5 bits (78), Expect = 0.026
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 212 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAN 337
PE + PFGQMP + +S A+ RY+ RKY + AN
Sbjct: 44 PEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEAN 85
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 34.3 bits (75), Expect = 0.060
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 200 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGR---KYGLAGANDEEAFEIDQNV 370
S PEF P G++PVLE +S AI RY+ R L G++ + I+Q +
Sbjct: 63 SNKTPEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWM 122
Query: 371 EF 376
+F
Sbjct: 123 DF 124
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 34.3 bits (75), Expect = 0.060
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 104 VKFYYFPVKALGESQRLLLAYGGQEFE----DNRISSENWPEFKPKTPFGQMPVLEIDGK 271
+K Y P+ + L G+++E D I+ PE + PFGQ+P L+
Sbjct: 3 MKVYGLPMSTNVARVLVCLEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDGDL 62
Query: 272 QYAQSTAICRYLGRK 316
+S AI +Y+ RK
Sbjct: 63 ILFESRAISKYVLRK 77
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 34.3 bits (75), Expect = 0.060
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 212 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 319
P+ + PFGQ+P + +S AICRY+ RK+
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 203 ENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKY 319
+N PE + PFG++P L+ +S AI +Y+ RKY
Sbjct: 41 QNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKY 79
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 212 PEFKPKTPFGQMPVLEIDGKQYA-QSTAICRYLGRK 316
P+ + PFGQ+P L+ DG + +S AIC+Y+ RK
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 212 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAG 331
P F PFGQ+P + +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 200 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYL 307
S PEF P G++PVLE +S AI RY+
Sbjct: 39 SNKTPEFLKMNPIGKIPVLETPDGPVFESNAIARYV 74
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 200 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYL 307
S PE+ P G++P+LE +S AI RY+
Sbjct: 600 SNKTPEYLKMNPIGKVPILETPDGPVFESNAIARYV 635
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 212 PEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYG 322
P + PFGQ+P E +S AI +Y+ RK+G
Sbjct: 44 PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHG 80
>01_01_1060 -
8363272-8365912,8366375-8366443,8366479-8366843,
8367403-8367550,8367630-8367873,8368105-8368407,
8368639-8368851,8368927-8369002,8369533-8369561,
8369610-8369984,8371784-8371927,8374053-8374086
Length = 1546
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 162 LTAARSSKTIAFHLKTGQNSNLRLRSVRCRCWKSTASSTLRAPPSAGTSVASTGSP 329
L R+S+++ HLK G S+L R RC + A + + A +A + A SP
Sbjct: 640 LHEGRASESLTTHLKAGGASDLTSFIGRVRCSPAVALALVVAAAAAAAATAKLYSP 695
>03_05_0468 - 24630701-24631399
Length = 232
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 125 VKALGESQRLLLAYGGQEFEDN--RISSENWPEFKPKTPFGQMPVLEIDGKQYAQSTAIC 298
V G R+ LA G +E+ +++++ GQ+PVL + GK +S I
Sbjct: 15 VSMYGNRVRIALARKGVAYEEKPENLAAKSALLLSSNPVHGQVPVLLVGGKPVCESLVIL 74
Query: 299 RYLGRKYGLAG 331
++ ++ G
Sbjct: 75 EFIDEEFAGVG 85
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 227 KTPFGQMPVLEIDGKQYAQSTAICRYLGRKYG----LAGANDEEAFEIDQNVE 373
++PFG++P E +S AI RY+ R Y L N EE+ +D +E
Sbjct: 48 RSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDMWME 100
>11_07_0003 - 27182551-27183054
Length = 167
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 261 STASSTLRAPPSAGTSVASTGSPG 332
ST S A PS+G + A+TGSPG
Sbjct: 57 STRSPVGSASPSSGRNPATTGSPG 80
>09_02_0431 -
9327167-9327226,9327347-9327474,9327594-9327709,
9327816-9327895,9328787-9328912,9329676-9329856,
9330514-9330578,9330655-9330915
Length = 338
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 165 TAARSSKTIAFHLKTGQNSNLRLRSVRCRC-WKSTASSTLRAPPSAGTS 308
TAA S A + S LRL + R R + STAS + APP+A S
Sbjct: 4 TAASSLSAAAAAARRSFPSRLRLLARRRRLPFSSTASFSAAAPPAAAAS 52
>09_02_0278 + 6691685-6692188
Length = 167
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 261 STASSTLRAPPSAGTSVASTGSPG 332
ST S A PS+G + A+TGSPG
Sbjct: 57 STRSPVGSASPSSGRNPATTGSPG 80
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +2
Query: 200 SENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLGRKYGLAGAND 340
++ P++ P G+ E D ++S I R++ KY G D
Sbjct: 42 TQRMPQYLKLQPLGEALTFEDDNLTLSESRGILRHIAHKYARQGNPD 88
>02_05_0600 - 30273080-30274692,30274709-30274949
Length = 617
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 249 RCWKSTASST-LRAPPSAG 302
RCW ST+SST L +PP G
Sbjct: 63 RCWASTSSSTGLPSPPPTG 81
>12_02_0157 - 14547645-14547935
Length = 96
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 131 ALGESQRLLLAYGGQEFEDNRISSENWPEFKPKTPFGQMPVLEIDGKQYAQSTAICRYLG 310
A+ + Q +LL Y G ++ NWP F + P + E D Q +A +G
Sbjct: 30 AMADFQLMLLVYAGGVVLTALVTVPNWPFFN-RHPLKWLDAAEADRHPRPQVSATPSTVG 88
Query: 311 RK 316
+K
Sbjct: 89 KK 90
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 98 PNVKFYYFPVKALGESQRLLLAYGGQEFEDNRISSENWPEFKPKTPFGQMPVLEIDGKQY 277
P VK Y+ + + R+L + E + +++ + +PV DG +
Sbjct: 11 PVVKLYHEKSMIMPDVSRVLACLYEKNIEFETVK-DSYKDILRLQASRSVPVPFYDGPTF 69
Query: 278 AQ-STAICRYLGRKYGLAG 331
Q S AICRY+ Y G
Sbjct: 70 LQESRAICRYIAETYEQRG 88
>04_04_0451 -
25323178-25323241,25323614-25323741,25324533-25324634,
25325314-25325382,25325489-25325557,25325646-25325720,
25325805-25325909,25326394-25326492,25326626-25328344,
25328629-25328931,25329031-25329129,25329733-25329850,
25329933-25330018,25330091-25330159,25330232-25330306,
25330675-25330772,25331271-25331432,25332391-25332556,
25332902-25332970,25333064-25333126,25333221-25333376,
25334027-25334365
Length = 1410
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 51 TCYRTIINYCTITRQCRTLSSTISPSRPSARARGCC 158
TC +TI+ C I+R ++ T R + CC
Sbjct: 395 TCIKTILRNCKISRILPRIADTAKNDRSAVLRARCC 430
>03_02_0104 +
5645285-5645677,5645990-5646034,5646225-5646454,
5646549-5646624,5646705-5646781,5646960-5646990,
5647058-5647210,5647287-5647421,5647526-5647606
Length = 406
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 130 GPRREPEAAAGLRRPG 177
GP REP AA G R+PG
Sbjct: 84 GPSREPGAAGGPRQPG 99
>03_02_0103 +
5640652-5641029,5641458-5641693,5642292-5642367,
5642450-5642526,5642672-5642702,5642798-5642950,
5643259-5643300,5643372-5643440,5643645-5643752
Length = 389
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 130 GPRREPEAAAGLRRPG 177
GP REP AA G R PG
Sbjct: 79 GPSREPGAAGGSREPG 94
>02_05_0160 - 26382377-26382874
Length = 165
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 243 RCRCWKSTA--SSTLRAPPSAGTSVASTG 323
RCRC + A SST+ PP G +V+ G
Sbjct: 34 RCRCHRHGAWSSSTMITPPPRGAAVSKLG 62
>02_05_0061 +
25506648-25509399,25509564-25509901,25510392-25510593,
25510779-25510854,25512036-25512294
Length = 1208
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 364 LVDLEGLLVIGPGEPVLATEVPADGGALSVLLAVDFQHRHLT 239
L +L L + G +L E+PA G LS L A+ QH L+
Sbjct: 195 LGNLSSLYFLNLGFNMLFGEIPASLGNLSQLNALGIQHNQLS 236
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -2
Query: 391 ANVVQELHVLVDLEGLLVIGPGEPVLATEVPADGGALSVLLAVDFQHRHLT 239
A + + L +L LLV+ GE L VPA G LS L+ V Q L+
Sbjct: 256 AKLTGSIPSLQNLSSLLVLELGENNLEGTVPAWLGNLSSLVFVSLQQNRLS 306
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,053,935
Number of Sequences: 37544
Number of extensions: 229503
Number of successful extensions: 923
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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