Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332G06f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 304 3e-85
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 301 4e-84
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 186 1e-49
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 153 1e-39
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.82
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.5
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 5.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 7.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 7.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 7.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 304 bits (747), Expect = 3e-85
Identities = 144/145 (99%), Positives = 144/145 (99%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGV 478
GEFEAGISKNGQTREHALLAFTLGV
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGV 145
Score = 29.9 bits (64), Expect = 0.017
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 478 QQLIVGVNKMDSTE 519
+QLIVGVNKMDSTE
Sbjct: 146 KQLIVGVNKMDSTE 159
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 301 bits (738), Expect = 4e-84
Identities = 142/145 (97%), Positives = 143/145 (98%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 403
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 404 GEFEAGISKNGQTREHALLAFTLGV 478
GEFEAGISKNGQTREHALLAFTLGV
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGV 145
Score = 26.6 bits (56), Expect = 0.15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 478 QQLIVGVNKMDSTE 519
+QLIVGVNKMD T+
Sbjct: 146 KQLIVGVNKMDMTD 159
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 186 bits (453), Expect = 1e-49
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = +2
Query: 215 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 394
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 395 AGTGEFEAGISKNGQTREHALLAFTLGV 478
AGTGEFEAGISKNGQTREHALLAFTLGV
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGV 88
Score = 29.9 bits (64), Expect = 0.017
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 478 QQLIVGVNKMDSTE 519
+QLIVGVNKMDSTE
Sbjct: 89 KQLIVGVNKMDSTE 102
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 153 bits (371), Expect = 1e-39
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 263 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 442
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 443 REHALLAFTLGV 478
REHALLAFTLGV
Sbjct: 61 REHALLAFTLGV 72
Score = 29.9 bits (64), Expect = 0.017
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 478 QQLIVGVNKMDSTE 519
+QLIVGVNKMDSTE
Sbjct: 73 KQLIVGVNKMDSTE 86
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 302 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 406
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.36
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKST 109
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.82
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 65 INIVVIGHVDSGKST 109
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 287 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 287 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 501 VYSYDELLTPRVKASKACSR 442
++ YD P+VK KA S+
Sbjct: 318 IWDYDSTYIPKVKNKKAGSK 337
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMG 193
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 448 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 362
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMG 193
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMG 193
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,390
Number of Sequences: 438
Number of extensions: 2777
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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