Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332G02f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079...    30   1.3  
09_04_0743 - 19862847-19864745,19865875-19866912                       29   1.7  
05_02_0100 + 6594787-6594878,6595443-6595728,6595809-6595887,659...    27   6.9  
10_08_0130 - 15032348-15033338,15033459-15033517                       27   9.1  

>01_07_0301 +
           42607239-42607277,42607374-42607577,42607669-42607965,
           42608055-42608222,42608393-42608560,42608653-42608733,
           42608844-42608910,42609326-42609423,42609665-42609737,
           42609826-42609896,42610013-42610062,42610145-42610257,
           42610341-42610384
          Length = 490

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +2

Query: 149 SIESIEFAKAMLNPQIAPKEKLTKLQNAING---HKDYTVQAL--QGFGVDRHLL 298
           S+  + +  A+ NP +AP+E LT++  +I     H+++T   L     GVD   L
Sbjct: 202 SLNLVGYTGALANPLVAPEESLTRINGSIIQKFYHENFTADRLVVAASGVDHQYL 256


>09_04_0743 - 19862847-19864745,19865875-19866912
          Length = 978

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 290 HLLGLKLIALENGIEL--PKLYTDPGYTRSAHMRISTSQVACKCDG 421
           H   LK +A  + + L   K+Y DP YT   HM    +++  +C G
Sbjct: 327 HAYELKTLAAPHDMRLLCQKVYKDPEYTLQLHMLEEANKILGRCRG 372


>05_02_0100 +
           6594787-6594878,6595443-6595728,6595809-6595887,
           6595964-6596013,6597281-6597478,6597555-6597612,
           6598388-6598496,6599253-6599321,6599684-6599812,
           6599970-6600082,6600386-6600479,6602827-6602917,
           6604145-6604233,6604715-6604856,6605849-6606196,
           6606314-6607408
          Length = 1013

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 137 IRSCSIESIEFAKAMLNPQIAPKEKLTKLQNAINGHKDYTVQALQGFGVDRH-LLGLKLI 313
           +RSC  E  E AK        P      L ++++ ++D ++QA    G + H  +  KL 
Sbjct: 681 LRSCDSEEAETAKGSAGVVKDPNSHKEPLLDSLDNNQDISIQA----GAEMHDSMDSKLC 736

Query: 314 ALENGIEL 337
           ++ N  +L
Sbjct: 737 SISNNADL 744


>10_08_0130 - 15032348-15033338,15033459-15033517
          Length = 349

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = +2

Query: 116 AGGRTETIRSCSIESIEFAKAMLNPQIAPKEKLTKLQNAINGHKDYTVQALQGFGVDRHL 295
           AGG T  I  C I S E +K  ++  +  ++      + ++ H  +++   QG  V  H 
Sbjct: 21  AGGHTWCIHYCPIGSTEESKDFISIYLVLEDTTA---DVVSAHVTFSLLDQQGNPVPSHT 77

Query: 296 LGLKLIALENGIELPK 343
           L   L+       LPK
Sbjct: 78  LTTPLLKFSLQGTLPK 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,362,330
Number of Sequences: 37544
Number of extensions: 292814
Number of successful extensions: 689
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)