Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332F10f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011494-1|AAR99152.1|   48|Drosophila melanogaster GM03834p pro...    30   2.2  
AE014134-2822|AAF53597.2|  391|Drosophila melanogaster CG31744-P...    28   8.8  

>BT011494-1|AAR99152.1|   48|Drosophila melanogaster GM03834p
           protein.
          Length = 48

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 507 ILVQLSSITY*ISRERIAIHYCLM*LILCSLFSYN 403
           I    S   Y   R  + +HYC++  +LCS+  +N
Sbjct: 7   ICSMFSVFVYLYVRALVLVHYCILLCVLCSMLDFN 41


>AE014134-2822|AAF53597.2|  391|Drosophila melanogaster CG31744-PA
           protein.
          Length = 391

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
 Frame = -3

Query: 456 AIH-YCLM*LILCSLFSYNCHLHSLLNFKHNT---FRSNVYLITNSLC*EQFLCANTNNL 289
           A+H YC   LI  S F ++C    +   +  T   F +N++++   +    F      NL
Sbjct: 11  AVHIYCY--LIGLSNFEFDCRTGRVFKSRRCTIYAFMANIFILITIIY--NFTAHGDTNL 66

Query: 288 LLYISNIMLLYK*S*QILMDCNKLIKCMLSKIFNYIYTSDL----KTIRRIYLLSPKLK 124
           L   +N +  Y     I+M   K++  +++ +  ++    +    K + R+Y+++P+LK
Sbjct: 67  LFQSANKLHEYV---IIIMSGLKIVAGLITVLNRWLQRGQMMQLVKDVIRLYMINPQLK 122


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,123,622
Number of Sequences: 53049
Number of extensions: 352177
Number of successful extensions: 583
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)