Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332F09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.26
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 34 0.26
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 34 0.26
AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens ... 34 0.35
BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongatio... 30 4.3
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 30 4.3
AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens ... 30 4.3
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 30 4.3
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 30 4.3
AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor El... 30 4.3
BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongatio... 30 5.7
BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology... 30 5.7
AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens ... 30 5.7
AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein. 30 5.7
AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein. 30 5.7
BC122524-1|AAI22525.1| 134|Homo sapiens putative protein produc... 29 7.5
BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein. 29 7.5
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 29 7.5
AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein pr... 29 7.5
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 29 7.5
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 29 7.5
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 29 7.5
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 29 7.5
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.26
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 311 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 490
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 491 STCPS 505
+ CPS
Sbjct: 483 APCPS 487
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.26
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 311 LPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALP 490
LPR+ + P + P R + R LPR C +P R C P + LP
Sbjct: 423 LPRQLSEPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPIPLP 482
Query: 491 STCPS 505
+ CPS
Sbjct: 483 APCPS 487
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.26
Identities = 22/62 (35%), Positives = 25/62 (40%)
Frame = +2
Query: 335 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 514
LP P PR TLP T P P GT TLP+ + P T PS +T
Sbjct: 220 LPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRT 279
Query: 515 RP 520
P
Sbjct: 280 LP 281
Score = 30.3 bits (65), Expect = 4.3
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = +2
Query: 335 LPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQT 514
LP + P P S TLP T P P GT TLP+ P T P+ +T
Sbjct: 226 LPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRT 285
Query: 515 RP 520
P
Sbjct: 286 LP 287
>AK128076-1|BAC87261.1| 140|Homo sapiens protein ( Homo sapiens
cDNA FLJ46197 fis, clone TESTI4007565. ).
Length = 140
Score = 33.9 bits (74), Expect = 0.35
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 287 CR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLP 418
CR S C P + P PG + P + PT RC+ P P
Sbjct: 10 CRLPSCCPCPCKTGDPGPGNRRRATPMWMPKGPTQERCRPYPPP 53
>BC103911-1|AAI03912.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 30.3 bits (65), Expect = 4.3
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +2
Query: 266 GSPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 436
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 437 GTSSRTATLPSRK--EGALPSTCPSR 508
+ +RTA LP + E A P P R
Sbjct: 170 ASPTRTAPLPMPEGPEPAAPGKQPGR 195
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 332 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 499
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 128
>AK123191-1|BAC85553.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ41197 fis, clone BRACE2045947. ).
Length = 221
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +2
Query: 365 RESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEG---ALPSTCPSRQ 511
R + + P CQ CP PS T SR ++ P R G ALP R+
Sbjct: 114 RRQRPAASRPHCQQCPWPSEPRRSSTPSRPSSTPPRPAGQGQALPQILIGRE 165
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 332 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 499
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 75 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 128
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform
a variant protein.
Length = 1474
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 332 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 499
P P + P+ R RSP +P PLP+ + +G + P R LP TC
Sbjct: 110 PRPTPRPVPMKRHIFRSPPVPATPPEPLPTTTEDEGLPAAPPIPPRR--SCLPPTC 163
>AB030834-1|BAA90665.1| 753|Homo sapiens transcription factor
Elongin A2 protein.
Length = 753
Score = 30.3 bits (65), Expect = 4.3
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +2
Query: 266 GSPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 436
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 437 GTSSRTATLPSRK--EGALPSTCPSR 508
+ +RTA LP + E A P P R
Sbjct: 170 ASPTRTAPLPMPEGPEPAAPGKQPGR 195
>BC036022-1|AAH36022.1| 753|Homo sapiens transcription elongation
factor B polypeptide 3B (elongin A2) protein.
Length = 753
Score = 29.9 bits (64), Expect = 5.7
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +2
Query: 266 GSPQNRNC-R*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPR-C-QTCPLPS*RDCQ 436
G P+N R S RR A P ++ P PR +R P R C + P S R +
Sbjct: 111 GFPENATAPRSPSHSPEHRRTARRTPPGQQRPHPRSHSREPRAERKCPRIAPADSGR-YR 169
Query: 437 GTSSRTATL--PSRKEGALPSTCPSR 508
+ +RTA L P E A P P R
Sbjct: 170 ASPTRTAPLRMPEGPEPAAPGKQPGR 195
>BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology
domain containing 1 protein.
Length = 780
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 332 PLPGR--KENPLPRESARSPTLPRCQTCPLP 418
P PGR +E+P P++ P+ P Q PLP
Sbjct: 326 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 356
>AK125322-1|BAC86128.1| 1685|Homo sapiens protein ( Homo sapiens cDNA
FLJ43332 fis, clone NT2RI3006340, highly similar to
Myomesin 1. ).
Length = 1685
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 314 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 430
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AJ621424-1|CAF18565.1| 1685|Homo sapiens myomesin 1 protein.
Length = 1685
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 314 PRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD 430
P +KA P K +PL +++ R+P P C L S RD
Sbjct: 910 PPQKAAPQGKSKSDPLKKKTDRAPPSPPCDITCLESFRD 948
>AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein.
Length = 797
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 332 PLPGR--KENPLPRESARSPTLPRCQTCPLP 418
P PGR +E+P P++ P+ P Q PLP
Sbjct: 344 PEPGRPGEESPAPKQELHQPSFPTPQLSPLP 374
>BC122524-1|AAI22525.1| 134|Homo sapiens putative protein product
of Nbla00301 protein.
Length = 134
Score = 29.5 bits (63), Expect = 7.5
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = +2
Query: 317 RRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RD-------CQGTS-SRTATLPSR 472
R ++ P PG L S R P P QT PS CQ S +R A LP+R
Sbjct: 6 RNQSSPPPG----DLHFRSLRLPVTPERQTADWPSCLKTQPDSDACQPASPTRAAALPTR 61
Query: 473 KEGALPSTCP 502
G P CP
Sbjct: 62 MGGTTPPRCP 71
>BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein.
Length = 954
Score = 29.5 bits (63), Expect = 7.5
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESS---CSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP R+ R S CS P R H L R + + S R P+ R + PS R +
Sbjct: 570 SPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHS---PSERSHRS 626
Query: 440 TSSRTATLPSRKEGALPS 493
S R+ PS + PS
Sbjct: 627 PSERSHRSPSERRHRSPS 644
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESSCSLPRRKAH---PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP+ R R S RR++ P P R+ P P R+P+ P + P P
Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI 600
Query: 440 TSSRTATLPSRKEGALPSTCPSRQTRP 520
+ + P ++ A P P R+ P
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASP 627
>AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 29.5 bits (63), Expect = 7.5
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESS---CSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP R+ R S CS P R H L R + + S R P+ R + PS R +
Sbjct: 461 SPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHS---PSERSHRS 517
Query: 440 TSSRTATLPSRKEGALPS 493
S R+ PS + PS
Sbjct: 518 PSERSHRSPSERRHRSPS 535
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESSCSLPRRKAH---PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP+ R R S RR++ P P R+ P P R+P+ P + P P
Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI 600
Query: 440 TSSRTATLPSRKEGALPSTCPSRQTRP 520
+ + P ++ A P P R+ P
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASP 627
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESSCSLPRRKAH---PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP+ R R S RR++ P P R+ P P R+P+ P + P P
Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI 600
Query: 440 TSSRTATLPSRKEGALPSTCPSRQTRP 520
+ + P ++ A P P R+ P
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASP 627
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESSCSLPRRKAH---PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP+ R R S RR++ P P R+ P P R+P+ P + P P
Sbjct: 539 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI 598
Query: 440 TSSRTATLPSRKEGALPSTCPSRQTRP 520
+ + P ++ A P P R+ P
Sbjct: 599 QRRYSPSPPPKRRTASPPPPPKRRASP 625
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.5 bits (63), Expect = 7.5
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +2
Query: 269 SPQNRNCR*ESSCSLPRRKAH---PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQG 439
SP+ R R S RR++ P P R+ P P R+P+ P + P P
Sbjct: 539 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI 598
Query: 440 TSSRTATLPSRKEGALPSTCPSRQTRP 520
+ + P ++ A P P R+ P
Sbjct: 599 QRRYSPSPPPKRRTASPPPPPKRRASP 625
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,371,254
Number of Sequences: 237096
Number of extensions: 943336
Number of successful extensions: 3367
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3348
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -