Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332F07f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.            31   1.9  
AJ271747-1|CAC01407.1|  591|Homo sapiens double stranded RNA bin...    31   1.9  
AF167570-1|AAD51099.1|  894|Homo sapiens nuclear factor associat...    31   1.9  
BC032828-1|AAH32828.1|  443|Homo sapiens SFRP4 protein protein.        29   9.9  
AF202445-2|AAF82685.1|  709|Homo sapiens dsRNA binding protein N...    29   9.9  

>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
          Length = 4061

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
 Frame = +2

Query: 50   ACQSCLESDVSGDGSRIRCS*WGRVGSSNWSTIRKRSCIGSGVLRDGGSNDRRSSQTCRN 229
            A +   + + SGDGSR   S      +S+W+   + S +G G      ++  R S   ++
Sbjct: 2189 ASRKTYDKEQSGDGSRHSGS--HHHEASSWADSSRHSLVGQGQSSGPRTSRPRGSSVSQD 2246

Query: 230  RNNRGSYGCGHNASSSDAG*YYGRLGNYSRSGS-HKR 337
             ++ G        S S +  ++G     SR GS H R
Sbjct: 2247 SDSEGHSEDSERRSGSASRNHHGSAQEQSRDGSRHPR 2283


>AJ271747-1|CAC01407.1|  591|Homo sapiens double stranded RNA
           binding nuclear protein, ILF3 protein.
          Length = 591

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 25/69 (36%), Positives = 32/69 (46%)
 Frame = +2

Query: 116 GRVGSSNWSTIRKRSCIGSGVLRDGGSNDRRSSQTCRNRNNRGSYGCGHNASSSDAG*YY 295
           G  G S+++   K +  GSG  R GG N   S     N  + G YG G    SS    Y 
Sbjct: 491 GGGGGSDYNYESKFNYSGSGG-RSGG-NSYGSGGASYNPGSHGGYGGGSGGGSS----YQ 544

Query: 296 GRLGNYSRS 322
           G+ G YS+S
Sbjct: 545 GKQGGYSQS 553


>AF167570-1|AAD51099.1|  894|Homo sapiens nuclear factor associated
           with dsRNA NFAR-2 protein.
          Length = 894

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 25/69 (36%), Positives = 32/69 (46%)
 Frame = +2

Query: 116 GRVGSSNWSTIRKRSCIGSGVLRDGGSNDRRSSQTCRNRNNRGSYGCGHNASSSDAG*YY 295
           G  G S+++   K +  GSG  R GG N   S     N  + G YG G    SS    Y 
Sbjct: 794 GGGGGSDYNYESKFNYSGSGG-RSGG-NSYGSGGASYNPGSHGGYGGGSGGGSS----YQ 847

Query: 296 GRLGNYSRS 322
           G+ G YS+S
Sbjct: 848 GKQGGYSQS 856


>BC032828-1|AAH32828.1|  443|Homo sapiens SFRP4 protein protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 164 IGSGVLRDGGSNDRRSSQTCRNRNNRG 244
           +G G  +D G   RR+   CR R+ RG
Sbjct: 69  LGEGTAKDEGGRKRRALSVCRGRSARG 95


>AF202445-2|AAF82685.1|  709|Homo sapiens dsRNA binding protein
           NFAR-2/MPP4 protein.
          Length = 709

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 24/69 (34%), Positives = 31/69 (44%)
 Frame = +2

Query: 116 GRVGSSNWSTIRKRSCIGSGVLRDGGSNDRRSSQTCRNRNNRGSYGCGHNASSSDAG*YY 295
           G    S+++   K +  GSG  R GG N   S     N  + G YG G    SS    Y 
Sbjct: 609 GGGSGSDYNYESKFNYSGSGG-RSGG-NSYGSGGASYNPGSHGGYGGGSGGGSS----YQ 662

Query: 296 GRLGNYSRS 322
           G+ G YS+S
Sbjct: 663 GKQGGYSQS 671


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,265,482
Number of Sequences: 237096
Number of extensions: 745472
Number of successful extensions: 1671
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)