Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332F07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    26   0.20 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.1  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 436 QGSYSLVEPDGTRRTVDYSADSVNGF 359
           QGS S   PDG + ++ Y AD  NGF
Sbjct: 72  QGSDSYTAPDGQQVSITYVADE-NGF 96


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
 Frame = +2

Query: 125 GSSNWSTIRKRSCIGSGVLRDGGSNDRRSSQTCRNRNNRGSYGC----GHNASSSDAG 286
           G++N +     +   +    + G+ND  +     N NN G   C    GH     D G
Sbjct: 231 GNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHYGHHPDPG 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,000
Number of Sequences: 438
Number of extensions: 1396
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)