Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332F02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.4  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   4.4  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   4.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   5.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   5.8  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   5.8  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   5.8  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -1

Query: 257 TMFWRRKPWQY 225
           ++FW++ PWQ+
Sbjct: 92  SVFWQQYPWQW 102


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 356 FCSVVNKAPSTLWPGSRLPKSNR 288
           FC++V+ +P T+ P + +  S R
Sbjct: 358 FCNIVSCSPQTVHPETIIDVSRR 380


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 56  STYPRLMCWRCWQPLRSSNCCRYRG 130
           S+Y ++   + WQ  RS  CC+  G
Sbjct: 58  SSYLQVSGSKIWQMERSCMCCQESG 82


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 35  IPAAALGSTYPRLMCWRCWQP 97
           + AAAL  TYP L+   C  P
Sbjct: 471 VVAAALTGTYPTLLPQWCLPP 491


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
          protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 26 NICIPAAALGSTYPRLMC 79
          ++C+PA  + S  P L C
Sbjct: 45 HLCLPAPRINSKSPLLSC 62


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
          protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 26 NICIPAAALGSTYPRLMC 79
          ++C+PA  + S  P L C
Sbjct: 45 HLCLPAPRINSKSPLLSC 62


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/39 (23%), Positives = 15/39 (38%)
 Frame = -1

Query: 215 CDAPYTLA*I*TETRLCRSTDLAALASQCLCSGNSWKNE 99
           C+    L  + T  R C  T +       +C G  +K +
Sbjct: 87  CEKNPKLGILGTHGRQCNDTSIGVDGCDLMCCGRGYKTQ 125


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/39 (23%), Positives = 15/39 (38%)
 Frame = -1

Query: 215 CDAPYTLA*I*TETRLCRSTDLAALASQCLCSGNSWKNE 99
           C+    L  + T  R C  T +       +C G  +K +
Sbjct: 88  CEKNPKLGILGTHGRQCNDTSIGVDGCDLMCCGRGYKTQ 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,065
Number of Sequences: 438
Number of extensions: 2809
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)