Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332E11f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1631 - 28258897-28259984,28260518-28260772,28260861-282609... 34 0.080
09_02_0252 - 6315834-6315959,6316074-6317018 32 0.24
01_04_0019 - 15134494-15135863,15135966-15136083,15136226-151362... 31 0.42
09_04_0543 - 18442571-18443111,18443232-18443426,18443507-184440... 31 0.74
07_01_0505 - 3759254-3759490,3759846-3759989,3760135-3760347,376... 30 0.98
10_03_0023 - 7151465-7152111,7152222-7152405 30 1.3
06_02_0203 + 12986685-12988691 29 1.7
02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356 29 2.3
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 3.0
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911... 29 3.0
01_06_0969 - 33472588-33474480,33475543-33475623,33475692-334757... 28 4.0
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 28 5.2
12_02_0123 - 13930138-13932471 27 6.9
09_04_0507 + 18194320-18195081 27 6.9
05_07_0290 + 29016410-29018920 27 6.9
03_01_0105 - 836347-836769,837740-837937 27 6.9
11_04_0274 - 15667178-15667444,15668352-15668678,15669430-156695... 27 9.1
06_03_0622 - 22820980-22822473 27 9.1
06_03_0621 + 22812810-22814267 27 9.1
06_01_0383 - 2749030-2750160,2752418-2752488,2753470-2753791 27 9.1
02_01_0379 + 2744535-2744581,2744653-2744712,2745334-2745461,274... 27 9.1
>07_03_1631 -
28258897-28259984,28260518-28260772,28260861-28260975,
28261097-28261149,28261238-28261498,28262122-28262175,
28262294-28262536,28262830-28263073,28263877-28263909
Length = 781
Score = 33.9 bits (74), Expect = 0.080
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -1
Query: 290 WLESVFVGAVLNHS*LASVVXVSIF-ALHVTRLRLGLDLEGPIGGFIAISVGAVFVVSVY 114
WL ++ + V + L +++ V F ++ V L + + P GG+ I VF++ +Y
Sbjct: 432 WLMALVIIFVWQKNILLALLFVVAFGSIEVVYLSAAVT-KVPQGGWAPIVFAFVFMLVMY 490
Query: 113 LFQYGHRRGDLFRLSGYVSRGAVL 42
++ YG RR LF L VS +L
Sbjct: 491 VWHYGSRRKYLFDLQNKVSMKWIL 514
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 391 TEPRLHNQTMTTRNPRLHRPR--DPVPNXNHNP 483
+ PRL + T +PR HRPR P N NH P
Sbjct: 47 SSPRLSTSSSRTPSPRAHRPRAATPFANENHPP 79
>01_04_0019 -
15134494-15135863,15135966-15136083,15136226-15136278,
15136293-15137271,15138980-15139054
Length = 864
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -1
Query: 245 LASVVXVSIFALHVTRLRLGLDLEGPIGGFIAISVGAVFVVSVYLFQYGHRRGDLFRLSG 66
+A++ V+ + L L ++ P GG++ + + VFV +Y++ YG RR F +
Sbjct: 522 VAALFLVAFGVVEAVYLSAAL-MKVPQGGWLPLVLSLVFVAVMYVWHYGTRRKHQFDVQN 580
Query: 65 YVS 57
VS
Sbjct: 581 KVS 583
>09_04_0543 -
18442571-18443111,18443232-18443426,18443507-18444045,
18444205-18444375,18444794-18445219
Length = 623
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 364 PGLSPSSLVDSSTRVGGATVMPSP-AGWNPYLLA 266
PGLSP++L++S + A PSP G P+L+A
Sbjct: 124 PGLSPTTLLESPVFLYNAMAQPSPTTGTLPFLMA 157
>07_01_0505 -
3759254-3759490,3759846-3759989,3760135-3760347,
3760439-3760990,3761339-3761806,3761959-3762023,
3762133-3762265,3763798-3764022
Length = 678
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -3
Query: 129 RCVCLSVSVWAQA---WRPL*AQWLCIEGRGPHC 37
R CLS++VW W L Q C +G G HC
Sbjct: 27 RPCCLSIAVWGNPHPPWHLLLRQHRCRDGEGQHC 60
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = -2
Query: 373 CDFPGL--SPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPYLPFTSP 200
CD G+ P LV +GG + P+P P L P P S L P P P
Sbjct: 163 CDDKGIFFPPLPLVPEPPNIGGVPIPPNPITPAPPSLVPPVFPTPSPPSILPPLTPQPPP 222
Query: 199 ACDLVSILKDP 167
+ + +L P
Sbjct: 223 SSLIPPVLPLP 233
>06_02_0203 + 12986685-12988691
Length = 668
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = -2
Query: 382 RPPCDFPGL-SPSSLVDSSTRVGGATVMPSPAGWNPYLLA-----PYSITRSLPVSSLYP 221
RPP DFP + +PS S+ G V+PSP + L + P S RS+ ++S P
Sbjct: 581 RPPLDFPPVHAPSPRSRSTELAGHPPVVPSPRHRSMDLASHGLALPSSRHRSMDLASHGP 640
Query: 220 YLP 212
LP
Sbjct: 641 VLP 643
>02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356
Length = 444
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYL-LAPYSITRSLPVS--SLYPY 218
PP FP ++P S S + GGA+++ SP G + L+P S + + P S ++ PY
Sbjct: 102 PPPVFPFVAPPSSPASFLQSGGASIVQSPVGAPSFSPLSPNSPSPTGPPSIFAIGPY 158
>07_03_0111 + 13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYS 257
PP P + PSS +T + P+ GW PY+ AP S
Sbjct: 1673 PPYSQPQVIPSSTFPMNTNI----FRPNHYGWQPYMNAPSS 1709
>01_06_1171 -
35089719-35090336,35090596-35090715,35090851-35091108,
35091934-35092563
Length = 541
Score = 28.7 bits (61), Expect = 3.0
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Frame = -2
Query: 382 RPPCDFPGLSPSSLVDSSTRVGG-------ATVMPSPAGWNPYLLAPYSITRSLPVSSLY 224
R P P +P ++ ST + G T PSP N +LL+P S T S+L
Sbjct: 455 RYPLQEPSAAPRKVMLKSTSLNGIIHHHPVVTFSPSPPSRNQHLLSPRSST-----SALL 509
Query: 223 PYLPFTSPACD---LVSILKDPS 164
P P TS A D + SI K PS
Sbjct: 510 P--PRTSCALDDPRVSSIKKSPS 530
>01_06_0969 -
33472588-33474480,33475543-33475623,33475692-33475740,
33475866-33476281,33477208-33477447
Length = 892
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 291 AGEGITVAPPTLVDESTRDEGLRPGKSQGGRSQYR-APAPQ 410
A G + + + E R E L P + GGR Q+R P PQ
Sbjct: 10 AAAGESSSAGAMAVEKPRFEALMPSEMSGGRPQFRKVPVPQ 50
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 348 EGLRPGKSQGGRSQYRAPAPQPDYDYE 428
+G PG QGG +YR P P P Y+
Sbjct: 297 QGRAPGY-QGGNQEYRGPPPPPPSAYQ 322
>12_02_0123 - 13930138-13932471
Length = 777
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 290 SRRGHHRCASDPRRRVDQGRGTQTREVAGRSITVPSPGS 406
+R G+HRC +D +V + T T + R V P S
Sbjct: 371 TRVGYHRCRTDKLLKVQNQKSTPTTSIQRRFDKVQPPES 409
>09_04_0507 + 18194320-18195081
Length = 253
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 330 DESTRDEGLRPGKSQGGRSQYRAPAPQPDYDYEE 431
D ST PG S+ + APA PD + EE
Sbjct: 119 DASTASPASAPGASEEAEGEEEAPAGAPDAEAEE 152
>05_07_0290 + 29016410-29018920
Length = 836
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 385 DRPPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPY 218
+R P D PG S + + + G + A N ++L PY+ L + +LY Y
Sbjct: 624 ERSPID-PGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEY 678
>03_01_0105 - 836347-836769,837740-837937
Length = 206
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 333 ESTRDEGLRPGKSQGGRSQYR-APAPQ 410
E R E L P + GGR Q+R P PQ
Sbjct: 10 EKPRFEALMPSEMSGGRPQFRKVPVPQ 36
>11_04_0274 -
15667178-15667444,15668352-15668678,15669430-15669563,
15669669-15669726,15669842-15669961,15670814-15670876,
15671388-15671539,15673002-15673116,15673907-15673981,
15674474-15674538,15675020-15675128
Length = 494
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +3
Query: 123 HNEDGSYTYG-YEAADGSFKIETKS-QAGDVKGKYGYXDDTGKLRVIEYGANKYGFQPAG 296
HN D Y DG I T++ + +KG + T + I +GA + G A
Sbjct: 45 HNADMFYNVDTLSVIDGMVVITTQNFELQYIKGLWRIWQATPLMGRISFGAAREGLSAAA 104
Query: 297 EGITVAPPTLVDESTRDEGL 356
+ VA + S+ +E +
Sbjct: 105 TAVAVAASVIGPHSSDEEAM 124
>06_03_0622 - 22820980-22822473
Length = 497
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 355 SPSSLVDSSTRVGGAT---VMPSPAGWNPYLLAPYSITRSLPVSSLYP 221
+P++L + R+ G+ V+P P+ P L A T +LP SLYP
Sbjct: 61 TPANLAFARRRLPGSVHLVVLPFPSLQPPLLPAGVESTDALPSMSLYP 108
>06_03_0621 + 22812810-22814267
Length = 485
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 355 SPSSLVDSSTRVGGAT---VMPSPAGWNPYLLAPYSITRSLPVSSLYP 221
+P++L + R+ G+ V+P P+ P L A T +LP SLYP
Sbjct: 61 TPANLAFARRRLPGSVHLVVLPFPSLQPPLLPAGVESTDALPSMSLYP 108
>06_01_0383 - 2749030-2750160,2752418-2752488,2753470-2753791
Length = 507
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1
Query: 176 EGPIGGFIAISVGAVFVVSVYLFQYGHRRGD 84
EG IGG +G V VVSV + + GH RGD
Sbjct: 65 EGGIGGVDEGGIGEVAVVSVGVGE-GHGRGD 94
>02_01_0379 +
2744535-2744581,2744653-2744712,2745334-2745461,
2745553-2745651,2745742-2745900,2746125-2746211,
2746300-2746391,2746629-2746703,2746805-2746984
Length = 308
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Frame = +3
Query: 129 EDGSYTYGYEAADGS-------FKIETKSQAGDVKGKYGYXDDTGKLRVIEY 263
E+G ++YGY +A G ++ G+ G +G D G R EY
Sbjct: 37 ENGKFSYGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGGARAAEY 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,911
Number of Sequences: 37544
Number of extensions: 327349
Number of successful extensions: 1239
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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