Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332E11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047118-1|AAH47118.1| 147|Homo sapiens C16orf13 protein protein. 31 3.2
AK057077-1|BAB71362.1| 147|Homo sapiens protein ( Homo sapiens ... 31 3.2
M57609-1|AAA52564.1| 1596|Homo sapiens DNA-binding protein protein. 29 9.9
BC117168-1|AAI17169.1| 1580|Homo sapiens GLI-Kruppel family memb... 29 9.9
BC113616-1|AAI13617.1| 1580|Homo sapiens GLI-Kruppel family memb... 29 9.9
BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific ... 29 9.9
BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific ... 29 9.9
BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific ... 29 9.9
AK223602-1|BAD97322.1| 681|Homo sapiens growth arrest-specific ... 29 9.9
AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens ... 29 9.9
AJ250408-1|CAB59315.1| 1580|Homo sapiens GLI3 protein protein. 29 9.9
AC005026-1|AAP21869.1| 376|Homo sapiens unknown protein. 29 9.9
>BC047118-1|AAH47118.1| 147|Homo sapiens C16orf13 protein protein.
Length = 147
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 376 PCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSI 254
P PG PS ++ VGG PS W+P L P S+
Sbjct: 106 PGGAPGAGPSCAAPAAAEVGGPRGPPSQPLWSPLLNVPPSL 146
>AK057077-1|BAB71362.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ32515 fis, clone SMINT1000100. ).
Length = 147
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 376 PCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSI 254
P PG PS ++ VGG PS W+P L P S+
Sbjct: 106 PGGAPGAGPSCAAPAAAEVGGPRGPPSQPLWSPLLNVPPSL 146
>M57609-1|AAA52564.1| 1596|Homo sapiens DNA-binding protein protein.
Length = 1596
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPYLPFTSP 200
PP FP P +D+ G PSP + P +T +L S YP LPF
Sbjct: 124 PPHLFPAFHPPVPIDARHHEGRYHYDPSP-------IPPLHMTSALSSSPTYPDLPFIR- 175
Query: 199 ACDLVSILKDPSAAS 155
+S ++P+AAS
Sbjct: 176 ----ISPHRNPAAAS 186
>BC117168-1|AAI17169.1| 1580|Homo sapiens GLI-Kruppel family member
GLI3 (Greig cephalopolysyndactyly syndrome) protein.
Length = 1580
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPYLPFTSP 200
PP FP P +D+ G PSP + P +T +L S YP LPF
Sbjct: 124 PPHLFPAFHPPVPIDARHHEGRYHYDPSP-------IPPLHMTSALSSSPTYPDLPFIR- 175
Query: 199 ACDLVSILKDPSAAS 155
+S ++P+AAS
Sbjct: 176 ----ISPHRNPAAAS 186
>BC113616-1|AAI13617.1| 1580|Homo sapiens GLI-Kruppel family member
GLI3 (Greig cephalopolysyndactyly syndrome) protein.
Length = 1580
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPYLPFTSP 200
PP FP P +D+ G PSP + P +T +L S YP LPF
Sbjct: 124 PPHLFPAFHPPVPIDARHHEGRYHYDPSP-------IPPLHMTSALSSSPTYPDLPFIR- 175
Query: 199 ACDLVSILKDPSAAS 155
+S ++P+AAS
Sbjct: 176 ----ISPHRNPAAAS 186
>BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 263 RRQQIRIPASRRGHHRCASDPRRRVDQGRGTQTREVAGRSITVPSPGSTTR 415
RR PAS R S R R+D+GR G ++VPSP R
Sbjct: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRAR 435
>BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 263 RRQQIRIPASRRGHHRCASDPRRRVDQGRGTQTREVAGRSITVPSPGSTTR 415
RR PAS R S R R+D+GR G ++VPSP R
Sbjct: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRAR 435
>BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 263 RRQQIRIPASRRGHHRCASDPRRRVDQGRGTQTREVAGRSITVPSPGSTTR 415
RR PAS R S R R+D+GR G ++VPSP R
Sbjct: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRAR 435
>AK223602-1|BAD97322.1| 681|Homo sapiens growth arrest-specific 2
like 1 isoform a variant protein.
Length = 681
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 263 RRQQIRIPASRRGHHRCASDPRRRVDQGRGTQTREVAGRSITVPSPGSTTR 415
RR PAS R S R R+D+GR G ++VPSP R
Sbjct: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRAR 435
>AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens
cDNA FLJ36067 fis, clone TESTI2019308, highly similar to
GAR22 PROTEIN. ).
Length = 681
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%)
Frame = +2
Query: 263 RRQQIRIPASRRGHHRCASDPRRRVDQGRGTQTREVAGRSITVPSPGSTTR 415
RR PAS R S R R+D+GR G ++VPSP R
Sbjct: 385 RRLTTGTPASPRRPPALRSQSRDRLDRGRPRGAPGGRGAQLSVPSPARRAR 435
>AJ250408-1|CAB59315.1| 1580|Homo sapiens GLI3 protein protein.
Length = 1580
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPYLPFTSP 200
PP FP P +D+ G PSP + P +T +L S YP LPF
Sbjct: 124 PPHLFPAFHPPVPIDARHHEGRYHYDPSP-------IPPLHMTSALSSSPTYPDLPFIR- 175
Query: 199 ACDLVSILKDPSAAS 155
+S ++P+AAS
Sbjct: 176 ----ISPHRNPAAAS 186
>AC005026-1|AAP21869.1| 376|Homo sapiens unknown protein.
Length = 376
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = -2
Query: 379 PPCDFPGLSPSSLVDSSTRVGGATVMPSPAGWNPYLLAPYSITRSLPVSSLYPYLPFTSP 200
PP FP P +D+ G PSP + P +T +L S YP LPF
Sbjct: 1 PPHLFPAFHPPVPIDARHHEGRYHYDPSP-------IPPLHMTSALSSSPTYPDLPFIR- 52
Query: 199 ACDLVSILKDPSAAS 155
+S ++P+AAS
Sbjct: 53 ----ISPHRNPTAAS 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,147,187
Number of Sequences: 237096
Number of extensions: 1673619
Number of successful extensions: 4984
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4976
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -