Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332E09f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130007-1|AAI30008.1| 967|Homo sapiens zinc finger with KRAB a... 39 0.012
AK001683-1|BAA91834.1| 738|Homo sapiens protein ( Homo sapiens ... 35 0.20
AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein. 35 0.20
BC109270-1|AAI09271.1| 556|Homo sapiens ZSCAN29 protein protein. 33 0.46
BC043612-1|AAH43612.1| 317|Homo sapiens ZSCAN29 protein protein. 33 0.46
AK093186-1|BAC04088.1| 732|Homo sapiens protein ( Homo sapiens ... 33 0.46
AF525399-1|AAO14995.1| 851|Homo sapiens KOX31-like zinc finger ... 33 0.46
AK131342-1|BAD18498.1| 505|Homo sapiens protein ( Homo sapiens ... 31 2.4
BC104942-1|AAI04943.1| 167|Homo sapiens chromosome 14 open read... 31 3.2
BC104940-1|AAI04941.1| 167|Homo sapiens chromosome 14 open read... 31 3.2
AK090706-1|BAC03507.1| 167|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF272900-1|AAF86274.1| 809|Homo sapiens cone photoreceptor cycl... 29 9.9
>BC130007-1|AAI30008.1| 967|Homo sapiens zinc finger with KRAB and
SCAN domains 2 protein.
Length = 967
Score = 38.7 bits (86), Expect = 0.012
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 259 NKQNIIWTKNSTIMLLN-LYETKIH-MLDNPKKKSKMWISIAEELKSLNVEVTADQVRWK 432
N + W T L+ L ET+ + L +KSK++ ++AE+L+ T +Q R K
Sbjct: 494 NLSGVHWGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTK 553
Query: 433 INALTKKYKDCIDNGQGAVSFKYFNEM 513
+L K Y+ + NG S ++ EM
Sbjct: 554 FKSLQKSYRK-VKNGHVLESCAFYKEM 579
Score = 31.1 bits (67), Expect = 2.4
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 VPTYNHNQNISQQEESDVNEMNKQNIIWTKNST-IMLLNLYETKIH-MLDNPKKKSKMWI 369
VP + + +Q++ + + + W+ T L L E++ + L + S+++
Sbjct: 316 VPARSAGKTWREQQQWGLEDEKIAGVHWSYEETKTFLAILKESRFYETLQACPRNSQVYG 375
Query: 370 SIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 513
++AE L+ T +Q R K +L K Y+ + NG +F +M
Sbjct: 376 AVAEWLRECGFLRTPEQCRTKFKSLQKSYRK-VRNGHMLEPCAFFEDM 422
>AK001683-1|BAA91834.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ10821 fis, clone NT2RP4001057. ).
Length = 738
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 211 HNQNISQQEESDVNEMNKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELK 390
H+ ISQ E D KQN W + + KI D P+K+ KM + IA
Sbjct: 31 HDSVISQWSEEDELADAKQNSEWMDECQDGMFEAWYEKIAQED-PEKQRKMHMFIARYCD 89
Query: 391 SLNVEVTAD 417
LNV+++ D
Sbjct: 90 LLNVDISCD 98
>AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.
Length = 2982
Score = 34.7 bits (76), Expect = 0.20
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 211 HNQNISQQEESDVNEMNKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELK 390
H+ ISQ E D KQN W + + KI D P+K+ KM + IA
Sbjct: 1738 HDSVISQWSEEDELADAKQNSEWMDECQDGMFEAWYEKIAQED-PEKQRKMHMFIARYCD 1796
Query: 391 SLNVEVTAD 417
LNV+++ D
Sbjct: 1797 LLNVDISCD 1805
>BC109270-1|AAI09271.1| 556|Homo sapiens ZSCAN29 protein protein.
Length = 556
Score = 33.5 bits (73), Expect = 0.46
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 VPTYNHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLN-LYETKIH-MLDNPKKKSKMWI 369
+P+ ++ +Q+ + + W T LL L +T+ + L N + S+++
Sbjct: 220 LPSKKDRRSWVEQDHWSFEDEKVAGVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYG 279
Query: 370 SIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 513
++AE L+ T +Q R K L K Y+ + +G + +F EM
Sbjct: 280 AVAERLREYGFLRTLEQCRTKFKGLQKSYRK-VKSGHPPETCPFFEEM 326
>BC043612-1|AAH43612.1| 317|Homo sapiens ZSCAN29 protein protein.
Length = 317
Score = 33.5 bits (73), Expect = 0.46
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 VPTYNHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLN-LYETKIH-MLDNPKKKSKMWI 369
+P+ ++ +Q+ + + W T LL L +T+ + L N + S+++
Sbjct: 129 LPSKKDRRSWVEQDHWSFEDEKVAGVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYG 188
Query: 370 SIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 513
++AE L+ T +Q R K L K Y+ + +G + +F EM
Sbjct: 189 AVAERLREYGFLRTLEQCRTKFKGLQKSYRK-VKSGHPPETCPFFEEM 235
>AK093186-1|BAC04088.1| 732|Homo sapiens protein ( Homo sapiens
cDNA FLJ35867 fis, clone TESTI2007922, weakly similar to
ZINC FINGER PROTEIN 29. ).
Length = 732
Score = 33.5 bits (73), Expect = 0.46
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 VPTYNHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLN-LYETKIH-MLDNPKKKSKMWI 369
+P+ ++ +Q+ + + W T LL L +T+ + L N + S+++
Sbjct: 101 LPSKKDRRSWVEQDHWSFEDEKVAGVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYG 160
Query: 370 SIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 513
++AE L+ T +Q R K L K Y+ + +G + +F EM
Sbjct: 161 AVAERLREYGFLRTLEQCRTKFKGLQKSYRK-VKSGHPPETCPFFEEM 207
>AF525399-1|AAO14995.1| 851|Homo sapiens KOX31-like zinc finger
protein protein.
Length = 851
Score = 33.5 bits (73), Expect = 0.46
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 VPTYNHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLN-LYETKIH-MLDNPKKKSKMWI 369
+P+ ++ +Q+ + + W T LL L +T+ + L N + S+++
Sbjct: 220 LPSKKDRRSWVEQDHWSFEDEKVAGVHWGYEETRTLLAILSQTEFYEALRNCHRNSQVYG 279
Query: 370 SIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 513
++AE L+ T +Q R K L K Y+ + +G + +F EM
Sbjct: 280 AVAERLREYGFLRTLEQCRTKFKGLQKSYRK-VKSGHPPETCPFFEEM 326
>AK131342-1|BAD18498.1| 505|Homo sapiens protein ( Homo sapiens
cDNA FLJ16359 fis, clone THYMU2028739, weakly similar
to ZINC FINGER PROTEIN 263. ).
Length = 505
Score = 31.1 bits (67), Expect = 2.4
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 196 VPTYNHNQNISQQEESDVNEMNKQNIIWTKNST-IMLLNLYETKIH-MLDNPKKKSKMWI 369
VP + + +Q++ + + + W+ T L L E++ + L + S+++
Sbjct: 316 VPARSAGKTWREQQQWGLEDEKIAGVHWSYEETKTFLAILKESRFYETLQACPRNSQVYG 375
Query: 370 SIAEELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 513
++AE L+ T +Q R K +L K Y+ + NG +F +M
Sbjct: 376 AVAEWLRECGFLRTPEQCRTKFKSLQKSYRK-VRNGHMLEPCAFFEDM 422
>BC104942-1|AAI04943.1| 167|Homo sapiens chromosome 14 open reading
frame 83 protein.
Length = 167
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -1
Query: 521 IWCISLKYLKDTAPCPLSMQSLYFFVSAFIFHLT*SAVTSTFNDFNSSAIDIHIFDF-FL 345
I + YL+ CPL ++ L + + +++ T + FN+ D FDF F+
Sbjct: 57 ILIVERMYLRLRGRCPLLLRCLIYTLWTYLWEFTTGFI---LRQFNACPWDYSQFDFDFM 113
Query: 344 GLSNICILVSYKFSNIIVEFFV 279
GL + V + +I+E F+
Sbjct: 114 GLITLEYAVPWFCGALIMEQFI 135
>BC104940-1|AAI04941.1| 167|Homo sapiens chromosome 14 open reading
frame 83 protein.
Length = 167
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -1
Query: 521 IWCISLKYLKDTAPCPLSMQSLYFFVSAFIFHLT*SAVTSTFNDFNSSAIDIHIFDF-FL 345
I + YL+ CPL ++ L + + +++ T + FN+ D FDF F+
Sbjct: 57 ILIVERMYLRLRGRCPLLLRCLIYTLWTYLWEFTTGFI---LRQFNACPWDYSQFDFDFM 113
Query: 344 GLSNICILVSYKFSNIIVEFFV 279
GL + V + +I+E F+
Sbjct: 114 GLITLEYAVPWFCGALIMEQFI 135
>AK090706-1|BAC03507.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ33387 fis, clone BRACE2006636. ).
Length = 167
Score = 30.7 bits (66), Expect = 3.2
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -1
Query: 521 IWCISLKYLKDTAPCPLSMQSLYFFVSAFIFHLT*SAVTSTFNDFNSSAIDIHIFDF-FL 345
I + YL+ CPL ++ L + + +++ T + FN+ D FDF F+
Sbjct: 57 ILIVERMYLRLRGRCPLLLRCLIYTLWTYLWEFTTGFI---LRQFNACPWDYSQFDFDFM 113
Query: 344 GLSNICILVSYKFSNIIVEFFV 279
GL + V + +I+E F+
Sbjct: 114 GLITLEYAVPWFCGALIMEQFI 135
>AF272900-1|AAF86274.1| 809|Homo sapiens cone photoreceptor cyclic
nucleotide-gated channel beta subunit protein.
Length = 809
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 243 RFFLLANVLIVIVCWNWHIWFVQIRL 166
R +LL +L+V + +NW+ WF+ +RL
Sbjct: 216 RLYLLW-LLLVTLAYNWNCWFIPLRL 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,968,320
Number of Sequences: 237096
Number of extensions: 1247153
Number of successful extensions: 2728
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2726
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -