Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332E06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.36 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   3.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   3.3  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   4.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.7  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   7.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -3

Query: 339 RQDT*GPRSFKKSLDPS*ILREFRVSSSFNVLPLASSLRA*RSGYRDFFTLCWIF 175
           RQ+T    S+  +  PS +LR    S+    L  ASSL+  R G   F    ++F
Sbjct: 4   RQETSNEDSYLSAGRPSNLLRTSFSSAKLEKLYRASSLQQRRGGLEYFLLSAFLF 58


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 135 ILPSGFALDTLRISISILC 79
           I P+G  L ++RIS+++ C
Sbjct: 142 IFPNGSVLYSIRISLTLSC 160


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 135 ILPSGFALDTLRISISILC 79
           I P+G  L ++RIS+++ C
Sbjct: 142 IFPNGSVLYSIRISLTLSC 160


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -1

Query: 419 YHIKSTVFDTPTSKQRVVQHIQLKTHSAKILEVQDLLKKAWI 294
           Y   S  +DT T + + + +  L  + +K +   + LK  WI
Sbjct: 129 YDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 170


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 115 RETARQDSRYR*KFDKECKRKNPTEREEISIPRS 216
           R  A Q +R+R   D E    + T   E S PRS
Sbjct: 235 RINAVQSTRHREADDAEESVSSETNHNERSTPRS 268


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 115 RETARQDSRYR*KFDKECKRKNPTEREEISIPRS 216
           R  A Q +R+R   D E    + T   E S PRS
Sbjct: 235 RINAVQSTRHREADDAEESVSSETNHNERSTPRS 268


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 133 DSRYR*KFDKECKR 174
           D +YR KF++E K+
Sbjct: 112 DKKYRVKFEEEAKK 125


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 115 RETARQDSRYR*KFDKECKRKNPTEREEISIPRS 216
           R  A Q +R+R   D E    + T   E S PRS
Sbjct: 235 RINAVQSTRHREADDAEESVSSETNHNERSTPRS 268


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 133 DSRYR*KFDKECKR 174
           D +YR KF++E K+
Sbjct: 112 DKKYRVKFEEEAKK 125


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +2

Query: 65   CYTDKHNMEIEILSVSSAKPLGKIHVTGESSIKNVKE 175
            C T     E+E+    + KP   +  + ++S  N K+
Sbjct: 965  CSTQSEYYELEVKDQKNGKPPSVVSRSTQTSANNDKD 1001


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,132
Number of Sequences: 438
Number of extensions: 2778
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)