Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332E02f
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0101 - 6788090-6788356,6788770-6788940 31 0.47
07_03_1292 - 25558643-25559376,25559989-25560097,25560578-255606... 31 0.62
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 29 1.9
04_01_0351 - 4616820-4617236 28 3.3
11_06_0297 + 22056644-22058212,22058316-22058423,22058513-220586... 28 4.4
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 28 4.4
04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051 28 4.4
01_05_0006 + 17008799-17009417,17010035-17010162,17010425-170106... 28 4.4
07_01_0675 + 5055842-5055950,5056036-5056193,5056276-5057067,505... 27 5.8
04_03_1000 + 21604164-21605387,21605467-21605817 27 5.8
03_02_0214 - 6486899-6487213,6487306-6487579,6487944-6489937 27 5.8
12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279,101... 27 7.6
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275... 27 7.6
03_02_0474 - 8759585-8759626,8759753-8759893,8760001-8760093,876... 27 7.6
>02_02_0101 - 6788090-6788356,6788770-6788940
Length = 145
Score = 31.1 bits (67), Expect = 0.47
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 160 ASQCICDVVPICRGRCVEMGTRSAMQASAG-VGEAA--RALSGEPWTMARRCLVP 5
A++ D +P G V +AM+ASA + E A RA S P+ + RCL+P
Sbjct: 15 AARSPADHIPAAAGTEVTARATTAMEASARTIAEEAVVRAPSANPYNSSERCLLP 69
>07_03_1292 -
25558643-25559376,25559989-25560097,25560578-25560676,
25560797-25560893,25560973-25561027,25561072-25561187,
25561445-25561562,25562369-25562684
Length = 547
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 77 ASLHGRPCAHLHAPTPTDRNDIAYTLTGIPQTIPFSRPKSNSMVPKFR 220
ASL+ R H H P D+ ++ +PQT+ RP+ ++P+FR
Sbjct: 493 ASLNVRQTVHHH---PLDQLGASFAPFNVPQTVYRPRPEGGYVMPQFR 537
>05_03_0031 -
7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 412 RHTSATPLNSDRRSPMPVKLSTTLAMHNEELRFYKQTKNNN 290
R S TP RRSP P K + + L K+ +NNN
Sbjct: 526 RVVSKTPQGRGRRSPQPPKTQRARTLSVKYLEKLKRAENNN 566
>04_01_0351 - 4616820-4617236
Length = 138
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 127 CRGRCVEMGTRSAMQASAGVGEAARALSGEP 35
CR C+E G+ ++ + +A GEAA + +G P
Sbjct: 65 CRSTCLEDGSPTSGRRAARSGEAASSSAGAP 95
>11_06_0297 +
22056644-22058212,22058316-22058423,22058513-22058678,
22059000-22059056,22059382-22059479,22059556-22059765,
22060469-22060582,22060819-22060948,22061165-22061298,
22062279-22062359,22062798-22062872,22063210-22063221
Length = 917
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 38 LATQCTRCLADARASLHGRPCAHLHAPTPTDRNDIAYTLTGIPQTIPFSRPKSNSMVPKF 217
LAT CL D A L R + PT N++AY L P R +N+
Sbjct: 118 LATVRFACLDDDDADLDIRRAVTIDYPTDPADNNVAYDLDDDDGATPKDR-IANARAAAI 176
Query: 218 RKHSMHVSFAIS 253
++++ ++F I+
Sbjct: 177 ERYNLIMAFVIA 188
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -2
Query: 418 APRHTSATPLNSDRRSPMPVKLSTTLAMHNEELRFYKQTKNNNKKIAPLKNVNREGYSET 239
+P + P+N D+ +P KL + + N R K K N+K K SE+
Sbjct: 56 SPNNDHVVPMNKDQLTPQGNKLRNHVTLPNHIDRTEKIAKMENEKGEAKKKKKICSKSES 115
Query: 238 HVHGMFTKFRN 206
+ F + +N
Sbjct: 116 QLQRKFKEGKN 126
>04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051
Length = 312
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -3
Query: 132 RSVGVGAWRWAHGRPCKLARASARQRVH*VASRGRWRVAA 13
R V +WR GR C +A RQR H +A R RWR A
Sbjct: 57 RGAAVQSWR---GRGCGVA--VRRQRRHGMAVRRRWRSCA 91
>01_05_0006 +
17008799-17009417,17010035-17010162,17010425-17010650,
17010792-17010925,17010988-17011161,17011234-17012238
Length = 761
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 112 RTDPDRSERHRIYTDWHPSNDSVFPTEVKLDGS*IS*TFHAREF 243
+T+P ++ R + + H +D V E+ + GS + HAREF
Sbjct: 698 KTEPAKNVRINKHLEEHKVSDHVKKKEIVMGGSRMQRNDHAREF 741
>07_01_0675 +
5055842-5055950,5056036-5056193,5056276-5057067,
5057544-5057760,5058280-5058449,5058986-5059630
Length = 696
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 36 GSPLSARAASPTPALACMADRVPISTHRPRQI 131
GSP +A AA+P M +P +TH QI
Sbjct: 349 GSPATATAANPAEVRRIMTMGLPFTTHHGGQI 380
>04_03_1000 + 21604164-21605387,21605467-21605817
Length = 524
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -2
Query: 190 RSGKRNRLRDASQCICDVVPICRGRCVEMGTRSAMQASAGVGEAARALSGE 38
R R R DA + DV +C E A Q +A EA +A +GE
Sbjct: 224 RESARERAMDAKDRVSDVAERAE-QCTEDAAGRAAQKAARAEEAVKAKAGE 273
>03_02_0214 - 6486899-6487213,6487306-6487579,6487944-6489937
Length = 860
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 27 IVHGSPLSARAASPTPA--LACMADRVPISTHRP 122
++ SPLS SP+P +A+ +PI HRP
Sbjct: 42 LIDDSPLSPSTPSPSPRPRTIVVANHLPIRAHRP 75
>12_01_0133 -
1011442-1011609,1011792-1011906,1012188-1012279,
1012384-1012469,1012989-1013088,1014139-1014333
Length = 251
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 316 FYKQTKNNNKKIA-PLKNVNREGYSETHVHGMFTKFRNHRV 197
F K++ +N+ + P ++N + Y ++H FT HR+
Sbjct: 17 FLKESASNHLSLCFPFPSLNLQSYWRGYIHSSFTSLFPHRL 57
>07_01_0370 +
2749353-2749786,2749949-2750346,2750435-2750519,
2751200-2751314,2751538-2751591
Length = 361
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 83 LHGRPCAHLHAPTPTDRNDIAYTLTGIPQTIPFSRPKSNSMVPKFRKHS 229
+H P A +PT T R+ + G+P +P + S ++ PK R S
Sbjct: 35 VHVHPWAAFPSPTATTRHAVVAAGGGVPCLLPRAAFPSPTLPPKPRAFS 83
>03_02_0474 -
8759585-8759626,8759753-8759893,8760001-8760093,
8760194-8760352
Length = 144
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Frame = +1
Query: 118 DPDRSERHR------IYTDWHPSNDSVFPTEVK 198
DPD SERH +W PS D+V+P K
Sbjct: 106 DPDASERHASCKGNPATNEWIPSADTVYPASDK 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,224,769
Number of Sequences: 37544
Number of extensions: 271411
Number of successful extensions: 964
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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