Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332E02f
         (470 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p pro...    30   1.8  
AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB...    30   1.8  
U33319-1|AAC47329.1|  515|Drosophila melanogaster MSH protein.         29   3.2  
AY069324-1|AAL39469.1|  515|Drosophila melanogaster LD04235p pro...    29   3.2  
AF009038-1|AAB62975.1|  515|Drosophila melanogaster muscle segme...    29   3.2  
AE014297-4391|AAF56902.2|  515|Drosophila melanogaster CG1897-PA...    29   3.2  
BT016078-1|AAV36963.1|  650|Drosophila melanogaster LP02208p pro...    29   4.2  
BT021469-1|AAX33617.1|  530|Drosophila melanogaster AT07710p pro...    27   9.7  
AE014297-695|AAF54189.1|  530|Drosophila melanogaster CG7910-PA ...    27   9.7  

>BT024943-1|ABE01173.1| 1116|Drosophila melanogaster IP16022p
           protein.
          Length = 1116

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/78 (20%), Positives = 35/78 (44%)
 Frame = -2

Query: 463 FSRAHRCSAPLHHTLAPRHTSATPLNSDRRSPMPVKLSTTLAMHNEELRFYKQTKNNNKK 284
           F+R++R   P       R+ +    N + R+  P + +  +   NE+   + +   N++ 
Sbjct: 311 FNRSNRNQNPQDFNRPNRNQNPQDFNRNNRNAYPHEFNRNIRNDNEQEFNHNRNAVNDEF 370

Query: 283 IAPLKNVNREGYSETHVH 230
               +NVN + + + H H
Sbjct: 371 NRNTRNVNNQAFPQGHNH 388


>AE014134-2240|AAF53222.3| 1334|Drosophila melanogaster CG5792-PB,
           isoform B protein.
          Length = 1334

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/78 (20%), Positives = 35/78 (44%)
 Frame = -2

Query: 463 FSRAHRCSAPLHHTLAPRHTSATPLNSDRRSPMPVKLSTTLAMHNEELRFYKQTKNNNKK 284
           F+R++R   P       R+ +    N + R+  P + +  +   NE+   + +   N++ 
Sbjct: 290 FNRSNRNQNPQDFNRPNRNQNPQDFNRNNRNAYPHEFNRNIRNDNEQEFNHNRNAVNDEF 349

Query: 283 IAPLKNVNREGYSETHVH 230
               +NVN + + + H H
Sbjct: 350 NRNTRNVNNQAFPQGHNH 367


>U33319-1|AAC47329.1|  515|Drosophila melanogaster MSH protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 39  SPLSARAASPTPALACMADRVPISTHRPRQIGTTSHI 149
           SP+S  +++P P  A  A +VP +T  P  +   +H+
Sbjct: 166 SPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHL 202


>AY069324-1|AAL39469.1|  515|Drosophila melanogaster LD04235p
           protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 39  SPLSARAASPTPALACMADRVPISTHRPRQIGTTSHI 149
           SP+S  +++P P  A  A +VP +T  P  +   +H+
Sbjct: 166 SPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHL 202


>AF009038-1|AAB62975.1|  515|Drosophila melanogaster muscle segment
           homeobox protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 39  SPLSARAASPTPALACMADRVPISTHRPRQIGTTSHI 149
           SP+S  +++P P  A  A +VP +T  P  +   +H+
Sbjct: 166 SPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHL 202


>AE014297-4391|AAF56902.2|  515|Drosophila melanogaster CG1897-PA
           protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 39  SPLSARAASPTPALACMADRVPISTHRPRQIGTTSHI 149
           SP+S  +++P P  A  A +VP +T  P  +   +H+
Sbjct: 166 SPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAHL 202


>BT016078-1|AAV36963.1|  650|Drosophila melanogaster LP02208p
           protein.
          Length = 650

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 30  VHGSPLSARAASPTPALACMADRVPIST 113
           +HGSP+ A AA+   A A  A   P+S+
Sbjct: 475 LHGSPIDASAAAAAAATAAAAGAAPVSS 502


>BT021469-1|AAX33617.1|  530|Drosophila melanogaster AT07710p
           protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 236 RAWNVYEI*EPSSLTSVGKTESFEGCQSVYMRCRSDLSGSVR 111
           R  N Y++ + +S  S G   S  GC +      SD+SGS+R
Sbjct: 187 RCLNPYDL-QRTSAGSSGGEASLNGCGATTFGVGSDISGSIR 227


>AE014297-695|AAF54189.1|  530|Drosophila melanogaster CG7910-PA
           protein.
          Length = 530

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 236 RAWNVYEI*EPSSLTSVGKTESFEGCQSVYMRCRSDLSGSVR 111
           R  N Y++ + +S  S G   S  GC +      SD+SGS+R
Sbjct: 187 RCLNPYDL-QRTSAGSSGGEASLNGCGATTFGVGSDISGSIR 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,361,418
Number of Sequences: 53049
Number of extensions: 441679
Number of successful extensions: 1426
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)