Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332E02f
         (470 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    29   1.3  
U64857-4|AAN84850.1|  356|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ...    27   5.1  
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    27   5.1  
Z70718-8|CAA94675.2|  301|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z22174-4|CAA80129.2|  361|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
           protein K04D7.5b protein.
          Length = 1287

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 379 RRSPMPVKLSTTLAMHNEELRFYKQTKNN--NKKIAPLKNVN 260
           R++P P+KLST + +   E R     KN+   + I+ L NV+
Sbjct: 708 RKNPTPMKLSTMIQLEEAEKRIADSQKNSCGGQTISALSNVS 749


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
           protein K04D7.5a protein.
          Length = 1338

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 379 RRSPMPVKLSTTLAMHNEELRFYKQTKNN--NKKIAPLKNVN 260
           R++P P+KLST + +   E R     KN+   + I+ L NV+
Sbjct: 708 RKNPTPMKLSTMIQLEEAEKRIADSQKNSCGGQTISALSNVS 749


>U64857-4|AAN84850.1|  356|Caenorhabditis elegans Hypothetical
           protein C37C3.7 protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
 Frame = -2

Query: 310 KQTKNNNKKIAPLKNVNREGYSETHVHGMFTKFRNHRV*LRSGKRNRLRDASQCICDVVP 131
           +Q K +   I P  +   +   + H+     K   HR  ++ G RNRLR  + C+  +  
Sbjct: 205 EQCKKHGPLIEPFPHCELDPSKKKHIE----KAAEHRQKVKKGIRNRLRIIAICVAALSV 260

Query: 130 IC----RGRCVEMGTRSAMQ 83
           +      GRC+     +A Q
Sbjct: 261 VAFVAFMGRCMHKNATTAKQ 280


>Z92782-6|CAB07191.1|  319|Caenorhabditis elegans Hypothetical
           protein F14F8.7 protein.
          Length = 319

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 9/31 (29%), Positives = 23/31 (74%)
 Frame = +3

Query: 177 RFPDRSQTRWFLNFVNIPCT*VSLYPSLFTF 269
           ++P R +T+++L+ +N+  + + ++PS+F F
Sbjct: 15  QYPSR-ETKFYLHLINVAISFIGIFPSVFHF 44


>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
            protein C08G9.2 protein.
          Length = 2224

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 95   PCAHLHAPTPTDRNDIAYTLTG 160
            P  H  AP PT+   IA+TL+G
Sbjct: 2007 PYDHASAPVPTESYQIAFTLSG 2028


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 11  EAATRHRPRLATQCTRCLADARASLHGRPCAHLHA 115
           E AT+  P L T CT+CL  +   +   P AH ++
Sbjct: 15  EEATQLIPCLHTFCTKCLKKSTKKMRVCPVAHCYS 49


>Z70718-8|CAA94675.2|  301|Caenorhabditis elegans Hypothetical
           protein C04G2.10 protein.
          Length = 301

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/49 (22%), Positives = 26/49 (53%)
 Frame = -2

Query: 190 RSGKRNRLRDASQCICDVVPICRGRCVEMGTRSAMQASAGVGEAARALS 44
           R G+  +L D S+C  +++ + + + V   T++ +     +GE  R ++
Sbjct: 26  RIGREKKLADDSRCYGNILDLVKRKKVTNWTQTRLVVEGKLGEGLRGIA 74


>Z22174-4|CAA80129.2|  361|Caenorhabditis elegans Hypothetical
           protein K01B6.2 protein.
          Length = 361

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 201 RWFLNFVNIPCT*VSLYPSLFTFFKGAI 284
           RW L++V+ PC  +++Y +   FF+G I
Sbjct: 164 RWMLDYVSPPCEMINVYYA--EFFRGLI 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,667,366
Number of Sequences: 27780
Number of extensions: 216144
Number of successful extensions: 735
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)