Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332D07f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    33   0.004
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    32   0.010
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    27   0.38 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.38 
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   1.5  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   6.2  
AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450 pr...    23   8.2  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 33.5 bits (73), Expect = 0.004
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
 Frame = +3

Query: 12   NQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLA--EVRSAATAKVE-EITK 182
            N E     +  ++ +L Q    +L ++ +      N  I+    E + A T+++  E+TK
Sbjct: 766  NLEAMTSTKEGLENELHQELMSQLSVQDQHEVDSLNDEIRRLNQENKEAFTSRMSLEVTK 825

Query: 183  D-IENKLTTAELNREKEIQKKLDFVKKEERRAELVR-QNKSARTE 311
            + +EN LT     R+ E+ + L  +  E+R+ +L   +N+   TE
Sbjct: 826  NKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATE 870


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 32.3 bits (70), Expect = 0.010
 Identities = 18/84 (21%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +3

Query: 45  IQEKLQQAADRRLLIEAEQ-REKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNR 221
           ++++L Q + ++   E E+  +K+      + E R   T    ++ KD++ K+   + +R
Sbjct: 727 LKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV-KDLQAKIADGKGHR 785

Query: 222 EKEIQKKLDFVKKEERRAELVRQN 293
           E+E++   + +K+ ++++E  R+N
Sbjct: 786 ERELKSAEEDLKRSKKKSEESRKN 809



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 21/100 (21%), Positives = 45/100 (45%)
 Frame = +3

Query: 12   NQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIE 191
            +++ F+ L+  I+E LQ+     ++   EQ  KL      L +     +   +E+T  + 
Sbjct: 813  HEQDFETLKLEIEE-LQKG----IVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVT 867

Query: 192  NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTE 311
                  + ++EK   +  +   K  +R +L++QN   + E
Sbjct: 868  ALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLE 907


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +3

Query: 48   QEKLQQAADRRLLIEAEQREKLRNHNI--KLAEVRSAATAKVEEITKDIENKLTTAELNR 221
            QE L +     +  +  QR  LR+ +   ++ E     TA+++    +    L    + R
Sbjct: 1029 QELLGEGGPDPVCPDTLQRHLLRDADSWSRICEGAKRITAQLQRAWDEERAALAVNVIER 1088

Query: 222  EKEIQKKLDFVKKEERRAELVRQNKSARTET 314
            + E   +L+  + E RRA   R+N + R  T
Sbjct: 1089 QDEDAAELEAQRAEVRRARNERRNANRRAAT 1119


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +3

Query: 96   EQREKLRNHNIKLAEVRSAATAK-VEEITKDIENKLTTAELNREKEIQKKLDFVKKEERR 272
            EQ  ++ N  +K+ + +     K +++++ +I +KLT      E+ +QK  D +   E  
Sbjct: 885  EQINEITNSKVKVLQTKINGLGKQIDKLSANI-SKLTVEIKTSERNVQKSKDKINSMEDE 943

Query: 273  AE----LVRQNKSARTE 311
             E     +R+    RT+
Sbjct: 944  VEAAQSAIRKGNDERTQ 960


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 129 KLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEE 266
           K AE      AKVEE  +         E+ R + IQK  D ++K++
Sbjct: 134 KEAERLRRDKAKVEEDQRHYRELKAADEIKRRELIQKAEDLIQKDK 179


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 45  IQEKLQQAADRRLLIEAEQREKLR 116
           +  K Q+  +RR LI  E+ EK+R
Sbjct: 32  LMTKQQEYTERRELIAREEMEKMR 55


>AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -2

Query: 403 VTDVKSDSCDVSVRGVC 353
           V ++ +D C++S+R +C
Sbjct: 12  VNEIGADFCELSLRAIC 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,457
Number of Sequences: 2352
Number of extensions: 5238
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)