SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332D05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    27   0.15 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    26   0.20 
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    25   0.62 
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    24   0.82 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    23   1.4  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   1.4  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   1.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.3  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   3.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.3  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   4.4  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   4.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   4.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   7.7  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   7.7  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   7.7  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   7.7  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   7.7  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.7  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y NY N
Sbjct: 308 RSKEPKIISSLSNNYKYSNYNNYNNYNN 335



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 11  FNKYNGLCKKNW*RRNNKIYRK 76
           +N YN     N+   N K+Y K
Sbjct: 327 YNNYNNYNNNNYNNYNKKLYYK 348


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = +2

Query: 257 TKISDAYKNSNTRN---NYDRYENYQN 328
           + +S+ YK SN  N   NY+ Y NY N
Sbjct: 316 SSLSNNYKYSNYNNYNNNYNNYNNYNN 342



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 308 RSKEPKIISSLSNNYKYSNYNNYNNNYN 335



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 248 SYSTKISDAYKNSNTRNNYDRYENYQN 328
           S + K S+    +N  NNY+ Y N  N
Sbjct: 319 SNNYKYSNYNNYNNNYNNYNNYNNNYN 345


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYEN 319
           Y N+N  NNY+ Y N
Sbjct: 329 YNNNNYNNNYNNYNN 343



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 248 SYSTKISDAYKNSNTRNNYDRYENYQN 328
           S S K      N N  N  + Y NY N
Sbjct: 317 SLSNKTIHNNNNYNNNNYNNNYNNYNN 343


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENY 322
           RS   KI  +  N+   +NY+ Y NY
Sbjct: 75  RSKEPKIISSLSNNYKYSNYNNYNNY 100



 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQN 328
           Y N N  NNY++   Y+N
Sbjct: 91  YSNYNNYNNYNKKLYYKN 108


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIVSSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSKEPKIISSLSNNYNYSNYNNYNNNNN 102



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQ 325
           Y N N  NN + Y NY+
Sbjct: 91  YSNYNNYNNNNNYNNYK 107


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N+   +NY+ Y N  N
Sbjct: 75  RSREPKIISSLSNNYNYSNYNNYNNNYN 102


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
 Frame = -1

Query: 140 CTNFCTRTW*IISRSI*FSTL------IFCRFYCY 54
           C    T T+ ++S SI F         I+CR YCY
Sbjct: 184 CALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCY 218


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/54 (24%), Positives = 21/54 (38%)
 Frame = +2

Query: 272 AYKNSNTRNNYDRYENYQNCQ*RSAERSI*KYIYTAKSKGNEYEPNEKSRRYRS 433
           +YKN N+   Y      ++      ERS  + I ++ S    Y  N     Y +
Sbjct: 282 SYKNENSYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNNYKYNYNN 335


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 455 LIRYRLLHYDTF*IFRWVRIHSLYFLRYKCTSRLNVP 345
           ++ Y   + DT  +  WV++  LY+L   C  R++ P
Sbjct: 315 ILNYHHRNADTHEMSEWVKVVFLYWL--PCILRMSRP 349


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 281 NSNTRNNYDRYENYQN 328
           N N  NNY+ Y N  N
Sbjct: 91  NYNYNNNYNNYNNNYN 106


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 418
           R Y    ++  K    + +  RY   +  + +S   ER   +Y  T++ +  + +  E+S
Sbjct: 17  RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76

Query: 419 RRYRSEAICTESEDKKYPYQTNFK*N 496
           +    + I + S + KY    N+  N
Sbjct: 77  KE--PKIISSLSNNYKYSNYNNYNNN 100


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 418
           R Y    ++  K    + +  RY   +  + +S   ER   +Y  T++ +  + +  E+S
Sbjct: 17  RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76

Query: 419 RRYRSEAICTESEDKKYPYQTNFK*N 496
           +    + I + S + KY    N+  N
Sbjct: 77  KE--PKIISSLSNNYKYSNYNNYNNN 100


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 418
           R Y    ++  K    + +  RY   +  + +S   ER   +Y  T++ +  + +  E+S
Sbjct: 17  RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76

Query: 419 RRYRSEAICTESEDKKYPYQTNFK*N 496
           +    + I + S + KY    N+  N
Sbjct: 77  KE--PKIISSLSNNYKYSNYNNYNNN 100


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQNCQ*RSA--ERSI*KYIYTAKSKGNEYEPNEKS 418
           R Y    ++  K    + +  RY   +  + +S   ER   +Y  T++ +  + +  E+S
Sbjct: 17  RQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERS 76

Query: 419 RRYRSEAICTESEDKKYPYQTNFK*N 496
           +    + I + S + KY    N+  N
Sbjct: 77  KE--PKIISSLSNNYKYSNYNNYNNN 100


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 62  YCYVFTNFFYIIHCT 18
           +C V  NFFY I+ T
Sbjct: 193 HCVVCQNFFYQIYAT 207


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N    NN +   NY N
Sbjct: 75  RSREPKIISSLSNKTIHNNNNYKYNYNN 102



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 275 YKNSNTRNNYDRYENYQN 328
           + N+N + NY+   NY N
Sbjct: 91  HNNNNYKYNYNNKYNYNN 108


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N    NN +   NY N
Sbjct: 75  RSREPKIISSLSNKTIHNNNNYKYNYNN 102


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N    NN +   NY N
Sbjct: 75  RSREPKIISSLSNKTIHNNNNYKYNYNN 102


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N    NN +   NY N
Sbjct: 75  RSREPKIISSLSNKTIHNNNNYKYNYNN 102


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N    NN +   NY N
Sbjct: 75  RSREPKIISSLSNKTIHNNNNYKYNYNN 102


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 245 RSYSTKISDAYKNSNTRNNYDRYENYQN 328
           RS   KI  +  N    NN +   NY N
Sbjct: 308 RSREPKIISSLSNKTIHNNNNYKYNYNN 335


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 81  SAKLDGPGNNSPSSGAKISTTTEFQRPNIVKGTPN 185
           +A L  PGN SPS      + T     N++  +P+
Sbjct: 54  TASLINPGNFSPSGPNSPGSFTAGCHSNLLSTSPS 88


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 81  SAKLDGPGNNSPSSGAKISTTTEFQRPNIVKGTPN 185
           +A L  PGN SPS      + T     N++  +P+
Sbjct: 54  TASLINPGNFSPSGPNSPGSFTAGCHSNLLSTSPS 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,389
Number of Sequences: 438
Number of extensions: 3456
Number of successful extensions: 79
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -