Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332D02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    27   0.088
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   0.82 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.5  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   3.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   3.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   5.8  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 27.5 bits (58), Expect = 0.088
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +1

Query: 208 MFYCKTCKSFVSDVALTRKSHTMSRCSNIVKYPCVLCGLV-LSNNALKTHM 357
           +F C+ C   +   A  ++           +Y CV+C  V  S N+L TH+
Sbjct: 5   LFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHI 55


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
 Frame = -1

Query: 359 FMWVFNALFE-STSPHSTHGYLTIFEHRDIV*DLRVSATSLTKDLHVLQ*NMFGTNSCHE 183
           F W    +F  S SP + +GY T+F H         S         +L+      NS HE
Sbjct: 251 FQWGEEGIFGMSLSPIAVNGYRTLFFHP------LSSRREFAVSTRILRDENLSQNSYHE 304

Query: 182 FDL 174
           F +
Sbjct: 305 FQI 307


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 265 SHTMSRCSNIVKYPCVLCGLVL 330
           SHTMS+ S  VK+  V+  L L
Sbjct: 162 SHTMSKLSRAVKFIIVIWLLAL 183


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 454 KCDNCEVHFVRKASVTIHSCSD 519
           +C  C   ++++  +T+H C D
Sbjct: 90  ECYCCRESYLKERHITLHHCYD 111


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +1

Query: 454 KCDNCEVHFVRKASVTIHSCSD 519
           +C  C   ++++  +T+H C D
Sbjct: 90  ECYCCRESYLKERHITLHHCYD 111


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 504 YCYRSFPNKMNFTVVALWIFRHGG 433
           YC  SF N + + V A WI+   G
Sbjct: 148 YCLFSFLNTIVYCVPAGWIWGDQG 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,348
Number of Sequences: 438
Number of extensions: 2375
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)