Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332C05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.4  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   2.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.3  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = -1

Query: 191 GEKPR-HASPR--RGGSAPRPTPGAPP 120
           G +P  H SP+  + GS P P+ G PP
Sbjct: 22  GPQPSPHQSPQAPQRGSPPNPSQGPPP 48


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 401 CHKSSKCLQCY 369
           C KSSK LQC+
Sbjct: 112 CKKSSKLLQCF 122


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 72  EYKIAETFSGQCTPG 116
           E + A+ FSG C PG
Sbjct: 523 ENEAADFFSGSCAPG 537


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 72  EYKIAETFSGQCTPG 116
           E + A+ FSG C PG
Sbjct: 523 ENEAADFFSGSCAPG 537


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 72  EYKIAETFSGQCTPG 116
           E + A+ FSG C PG
Sbjct: 523 ENEAADFFSGSCAPG 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,352
Number of Sequences: 438
Number of extensions: 2556
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)