Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332C02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p pro...    29   5.1  
AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-P...    29   5.1  
AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-P...    29   5.1  
BT023506-1|AAY84906.1|  444|Drosophila melanogaster LD16996p pro...    28   8.8  
AY061932-1|AAL31643.1|  444|Drosophila melanogaster alpha 1,3 fu...    28   8.8  
AJ302046-1|CAC41642.1|  444|Drosophila melanogaster fucosyltrans...    28   8.8  
AE014134-1635|AAF52773.4|  444|Drosophila melanogaster CG4435-PA...    28   8.8  

>AY121620-1|AAM51947.1| 1353|Drosophila melanogaster GH06739p
           protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 135 CLVCKNKICIDTKSA--QIMRRFNLDNVTYAGCITRSISKLMDS 260
           C  C+ KIC D KSA   I+RR   +   +   I RS+ +L DS
Sbjct: 109 CAHCEKKICEDCKSAHMDILRR---EITRFNSQIRRSLHRLQDS 149


>AE013599-2803|AAF57611.2| 1353|Drosophila melanogaster CG15105-PB,
           isoform B protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 135 CLVCKNKICIDTKSA--QIMRRFNLDNVTYAGCITRSISKLMDS 260
           C  C+ KIC D KSA   I+RR   +   +   I RS+ +L DS
Sbjct: 109 CAHCEKKICEDCKSAHMDILRR---EITRFNSQIRRSLHRLQDS 149


>AE013599-2802|AAF57612.2| 1353|Drosophila melanogaster CG15105-PA,
           isoform A protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 135 CLVCKNKICIDTKSA--QIMRRFNLDNVTYAGCITRSISKLMDS 260
           C  C+ KIC D KSA   I+RR   +   +   I RS+ +L DS
Sbjct: 109 CAHCEKKICEDCKSAHMDILRR---EITRFNSQIRRSLHRLQDS 149


>BT023506-1|AAY84906.1|  444|Drosophila melanogaster LD16996p
           protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 182 LCRFCVNADFIFTHQTAASLQYVCFRFWKPVIL 84
           L RF     F+   + AA   Y+  +FW+P+I+
Sbjct: 228 LLRFLSEYKFMIAIENAACPDYITEKFWRPLIM 260


>AY061932-1|AAL31643.1|  444|Drosophila melanogaster alpha 1,3
           fucosyltransferase protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 182 LCRFCVNADFIFTHQTAASLQYVCFRFWKPVIL 84
           L RF     F+   + AA   Y+  +FW+P+I+
Sbjct: 228 LLRFLSEYKFMIAIENAACPDYITEKFWRPLIM 260


>AJ302046-1|CAC41642.1|  444|Drosophila melanogaster
           fucosyltransferase homologue protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 182 LCRFCVNADFIFTHQTAASLQYVCFRFWKPVIL 84
           L RF     F+   + AA   Y+  +FW+P+I+
Sbjct: 228 LLRFLSEYKFMIAIENAACPDYITEKFWRPLIM 260


>AE014134-1635|AAF52773.4|  444|Drosophila melanogaster CG4435-PA
           protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 182 LCRFCVNADFIFTHQTAASLQYVCFRFWKPVIL 84
           L RF     F+   + AA   Y+  +FW+P+I+
Sbjct: 228 LLRFLSEYKFMIAIENAACPDYITEKFWRPLIM 260


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,244,929
Number of Sequences: 53049
Number of extensions: 448413
Number of successful extensions: 820
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)