Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332C01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0071 - 20491521-20492813                                        133   7e-32
03_02_0392 - 8070342-8071628                                           43   2e-04
07_03_0216 + 15286968-15286970,15287068-15287213,15288333-152883...    30   1.3  
12_01_0849 + 7948693-7948996,7949829-7950610                           29   2.3  
07_01_0936 + 7932772-7933324,7933550-7934414,7934714-7934786           28   4.0  

>03_05_0071 - 20491521-20492813
          Length = 430

 Score =  133 bits (322), Expect = 7e-32
 Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
 Frame = -1

Query: 482 IEESTSRQSALDXXXXXXXXXXXXANRKDYWLTEGIVVKIVTKSLGDKFY-KRKAVVERV 306
           I  + +R+SALD            +NRKDYWL  GIVVK+++KSL +K Y K+K VV+RV
Sbjct: 285 INAAEARRSALDELMKEEEKAKERSNRKDYWLCPGIVVKVMSKSLAEKGYCKQKGVVKRV 344

Query: 305 IDKYGAEVRIVDEKIKLKLDQNHLETVVPSCGRKVRVVNGAYRGCVGTLRDVRTDAYSCD 126
           IDKY  E+ +++ K  L++DQ+ LETV+P  G  VR+VNGAYRG    L  V T+ +   
Sbjct: 345 IDKYVGEIEMLESKHVLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLSVDTERFCAK 404

Query: 125 IEIAEGPLTGRLVKGVEYEDISKL 54
           +++ +G   G+++K +EYEDI K+
Sbjct: 405 VQVEKGLYDGKVLKAIEYEDICKI 428


>03_02_0392 - 8070342-8071628
          Length = 428

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
 Frame = -1

Query: 392 WLTEGIVVKIVTKSLGDKFYKRKAVVERVIDKYGAEVRIVDEKIKL--KLDQNHLETVVP 219
           WL   I V++V++ L  K Y +K  V  V+     ++ I+D++ +L   ++Q+ LETV+P
Sbjct: 310 WLHSDIKVRVVSERLSKKLYLKKGRVLDVVGPTTCDI-IMDDQSELVQGVEQDMLETVLP 368

Query: 218 SCGRKVRVVNGAYRGCVGTLRDVRTDAYSCDIEIAEGPLTGRLVKGVEYEDISK 57
                V ++ G ++G  G L +  ++  +  +E++    T  +++ V+Y+ I++
Sbjct: 369 RMNGLVLLLAGEHKGLCGHLVEKNSEEETGVVELSN---TKDMIR-VKYDQIAE 418


>07_03_0216 +
           15286968-15286970,15287068-15287213,15288333-15288335,
           15288514-15288697,15289772-15289824,15290118-15290206,
           15291270-15291506,15293494-15293687,15293774-15293834,
           15293905-15294022,15294093-15294174,15295212-15295337,
           15295435-15295530,15295945-15296099,15296706-15296802,
           15296926-15297003,15297085-15297192
          Length = 609

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -1

Query: 404 RKDYWLTEG--IVVKIVTKSLGDKFYKRKAVVERVIDKY-GAEVRIVDEKIKLKLDQNHL 234
           ++++WL +G  ++VK++ K    +        + + D   G E   V  +I+LK+DQNH 
Sbjct: 452 KENHWLDDGAYLMVKLLNKLAAARILNPNVGSKVLTDLVEGLEEASVTVEIRLKIDQNHA 511

Query: 233 E 231
           +
Sbjct: 512 D 512


>12_01_0849 + 7948693-7948996,7949829-7950610
          Length = 361

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = +1

Query: 67  SSYSTPFTSRPVRGPSAISMSQL*ASVRTSRSVPTHPRYAPFTTRTLRPQDGTT 228
           SS+  PF         AIS S + AS   S + P HP  A    R LR    TT
Sbjct: 286 SSFGNPFRRARAPADVAISSSGIAASRLPSATPPLHPNPACVRYRRLRSSSLTT 339


>07_01_0936 + 7932772-7933324,7933550-7934414,7934714-7934786
          Length = 496

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = -1

Query: 329 RKAVVERVIDKYGAEVRIVDEKIKLKLDQNHLETVVPSCGRKVRVVNGAYRGCVGTLRDV 150
           +KA+   +++K GAE+R   +++K K+DQ      + S G     +N   R  VG + D+
Sbjct: 431 KKAIKRLMVEKEGAEIRERAKELKKKMDQ-----CLESSGSSQIAIN---RSLVGPMHDI 482


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,573,788
Number of Sequences: 37544
Number of extensions: 175685
Number of successful extensions: 429
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)