Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332B11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81015-6|CAE17725.1|  209|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U23455-6|AAC46536.2|  518|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z81015-6|CAE17725.1|  209|Caenorhabditis elegans Hypothetical
           protein C11E4.8 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 377 LANFLLFIISDVDSRSNSDQSFNRFSFI 294
           L     FI++D D R+NS   F+RF  +
Sbjct: 120 LTLLFFFIVTDEDERTNSSHFFHRFLIV 147


>U23455-6|AAC46536.2|  518|Caenorhabditis elegans Hypothetical
           protein F55E10.7 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 176 FQSVISGQAINYLLNKSYLPLKTSILVPVPILATLIYHXXXXXXXXXXXQNYFC 337
           +++V+   A  YL+  S + L +  L+PVP++ T +Y             +YFC
Sbjct: 77  YKTVVQSSAYVYLIILSVVDLFS--LIPVPMIVTDVYVNHFPFGLWACKLSYFC 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,776,863
Number of Sequences: 27780
Number of extensions: 118741
Number of successful extensions: 188
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)