Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332B10f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 36 0.003
SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr... 27 2.2
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 26 3.0
SPBC1347.07 |rex2||RNA exonuclease|Schizosaccharomyces pombe|chr... 26 3.9
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 3.9
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 25 5.2
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 25 5.2
SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual 25 6.8
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 25 9.0
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 25 9.0
SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase Ssp2|Schiz... 25 9.0
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 36.3 bits (80), Expect = 0.003
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +1
Query: 1 WVQENIQQFCGNKDSVTIFGISAGSAS----VEYLQLSPSSRGLFQQAILQS-GSSLNHW 165
W ++I+ F GNK+++ + GISAGS S + Y P + + ++A+L S G S+
Sbjct: 176 WTYKHIESFGGNKENIAVGGISAGSYSALFQLIYETYHPEANQIIKRALLLSNGLSVQPK 235
Query: 166 AIE 174
++E
Sbjct: 236 SVE 238
>SPAC6G10.06 |||amino acid oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 232 KGDHRAIYNFIFGKSFEELSDVVLKYSKSSNFKGTKFGFVPS 357
K +R +N +E++D+VL + SN+ F F+P+
Sbjct: 275 KDSNRCFFNPFEIIELKEMTDLVLSENTKSNYLDASFKFLPT 316
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 410 W*GYSVRKASPLPKSFSTDGTKPNF 336
W + ++ + +P SFS D KP+F
Sbjct: 161 WVSFQIKSSFSIPTSFSNDLKKPSF 185
>SPBC1347.07 |rex2||RNA exonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 180
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 181 IKELGFKMANDLGYNETKGDHRAIYNFI 264
IKEL + D+ + KGDHRA+ + +
Sbjct: 138 IKELAKRWCPDIPAYDKKGDHRALSDIL 165
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 3.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 250 WPCGLL*FHYIQGRLPF 200
W CG++ F + G+LPF
Sbjct: 192 WSCGIIFFALLTGKLPF 208
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 5.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 331 GTKFGFVPSVEKDFGNGDAF 390
G + G+ PS +DFG+G AF
Sbjct: 47 GQRKGWFPSSPEDFGDGGAF 66
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NLDPVSITGPLNMTSKNLDSKWQTTLDIMK 229
N+DPV I L+ +K ++ KW + + I K
Sbjct: 339 NVDPVKIQQILHKQNKIIEEKWISQIRISK 368
>SPCC736.08 |cbf11||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Manual
Length = 613
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 116 DYFNRQYYNLDPVSITGPLNMTSKNLDS 199
DYF + N+ + +G LN+ NLD+
Sbjct: 3 DYFAWDFANISGSNTSGSLNLNQLNLDN 30
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -1
Query: 143 DCNIAC*NNPLDEGDNCK 90
DC C NNP +G CK
Sbjct: 330 DCGEDCENNPCCDGKTCK 347
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 182 SKNLDSKWQTTLDIMKLKETTGPFTTL 262
S NL S TT+D L T PFT +
Sbjct: 371 SSNLFSDATTTMDTKSLFNNTSPFTPI 397
>SPCC74.03c |ssp2|ucp9|serine/threonine protein kinase
Ssp2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 250 WPCGLL*FHYIQGRLPF 200
W CG++ + + GRLPF
Sbjct: 215 WSCGIVLYVMLVGRLPF 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.137 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,286,412
Number of Sequences: 5004
Number of extensions: 49177
Number of successful extensions: 161
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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