Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332B09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         25   2.0  
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.6  
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.6  
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         24   3.6  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   3.6  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   3.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   6.2  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.2  

>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 390 SSKTASITQSAFLNLA*SNVGSRFDKYLSFCRDEILLRFT 271
           S+ TAS  QS  +    +  GS  D+  +FC  E++   T
Sbjct: 10  STSTASTAQSECVRSVTTASGSLIDRGRTFCSGELIFEDT 49


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 390 SSKTASITQSAFLNLA*SNVGSRFDKYLSFCRDEIL 283
           S+ TAS  QS  +    +  GS  D+  +FC  E++
Sbjct: 10  STSTASTAQSECVRSVTTASGSLIDRGRTFCSGELI 45


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 390 SSKTASITQSAFLNLA*SNVGSRFDKYLSFCRDEIL 283
           S+ TAS  QS  +    +  GS  D+  +FC  E++
Sbjct: 10  STSTASTAQSECVRSVTTASGSLIDRGRTFCSGELI 45


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 390 SSKTASITQSAFLNLA*SNVGSRFDKYLSFCRDEIL 283
           S+ TAS  QS  +    +  GS  D+  +FC  E++
Sbjct: 10  STSTASTAQSECVRSVTTASGSLIDRGRTFCSGELI 45


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 390 SSKTASITQSAFLNLA*SNVGSRFDKYLSFCRDEIL 283
           S+ TAS  QS  +    +  GS  D+  +FC  E++
Sbjct: 28  STSTASTAQSECVRSVTTASGSLIDRGRTFCSGELI 63


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 390 SSKTASITQSAFLNLA*SNVGSRFDKYLSFCRDEIL 283
           S+ TAS  QS  +    +  GS  D+  +FC  E++
Sbjct: 28  STSTASTAQSECVRSVTTASGSLIDRGRTFCSGELI 63


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 168 TIPAPIKPAPRTPI 127
           ++PAPI P+P  PI
Sbjct: 53  SLPAPIVPSPGAPI 66


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 343 CQVQ-KCGLCN*SRFRGH*HQAQSNQR 420
           CQ + KC LC  +   GH   A+S QR
Sbjct: 544 CQNEAKCALCGGAHHIGHSECARSAQR 570


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,012
Number of Sequences: 2352
Number of extensions: 11179
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)