Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332B07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0724 + 20975942-20976867,20977397-20977476,20977976-209783...    33   0.11 
02_02_0397 - 9763789-9763924,9764264-9764439,9764569-9764686,976...    27   6.9  
05_04_0283 - 19809137-19809826                                         27   9.1  
02_02_0255 + 8357963-8358356,8358948-8359024,8359201-8359276,835...    27   9.1  

>07_03_0724 +
           20975942-20976867,20977397-20977476,20977976-20978370,
           20988410-20989444
          Length = 811

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
 Frame = -3

Query: 507 YRLESKHRCXRIQRPCLVSDWSCLQLPSTYSYHFITFVANIFLPSGSVDLFTMHGPSWQD 328
           + +E  H       P + S +  L+        ++T V  + + S    L+T+H   W D
Sbjct: 80  WAIEENHTACLCFDPAISSHFHVLEYVEEDEDSYVTLVTGVEIYSSETGLWTLHENGWND 139

Query: 327 SVV-SFEMRMISVQAS---HGVQPTD 262
            VV S  +   SV  +   H V P D
Sbjct: 140 EVVISLSVNRRSVLLNGFLHSVTPAD 165


>02_02_0397 -
           9763789-9763924,9764264-9764439,9764569-9764686,
           9764813-9765088,9765200-9765267,9765386-9766005,
           9766229-9766381,9768793-9768890,9769016-9769107,
           9769212-9769295
          Length = 606

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 517 PDWI*TRV*ASMXKNTETMPGVRLVVSAAAQYIQLSLHNVRRKHIPAFGKRG 362
           PDW    + +++   T T+P +   V+   Q + +    V+ KH P +GK G
Sbjct: 546 PDWSPAMIKSAII-TTGTLPPLLYQVAVDVQLVTVG--GVKEKHAPDYGKNG 594


>05_04_0283 - 19809137-19809826
          Length = 229

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 218 CRYCAHWE-ALKWLN*NSRCPCTK 150
           C +  HW  AL+WL   + CPC +
Sbjct: 174 CGHRFHWHCALRWLARRNTCPCCR 197


>02_02_0255 +
           8357963-8358356,8358948-8359024,8359201-8359276,
           8359665-8359846,8360173-8360318,8360405-8360669,
           8360688-8361053,8361265-8361513
          Length = 584

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 465 PCLVSDWSCLQLPSTYSYHFITFVANIFLPSGSVDLFTMHGP 340
           PC  + W  L L    +Y F+ F +  +L SGS  L  + GP
Sbjct: 71  PCTTTAWGNLFL--VLAYGFLMFKSATYLSSGSEMLLQILGP 110


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,666,891
Number of Sequences: 37544
Number of extensions: 270580
Number of successful extensions: 593
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)