Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS332A10f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 147 5e-36
08_02_0774 - 21047696-21048889 146 9e-36
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 146 1e-35
01_06_1220 + 35493575-35494765 145 2e-35
07_03_1371 - 26100553-26101767 143 9e-35
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 138 2e-33
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 138 2e-33
02_01_0042 + 295608-296222,298479-298925 49 3e-06
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 31 0.42
04_04_0587 + 26410808-26411338 31 0.74
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 30 0.98
10_06_0120 - 10979458-10979665,10979909-10980585,10981315-109815... 29 1.7
05_04_0057 + 17543016-17543312 29 1.7
05_03_0485 + 14608663-14608989,14609265-14609535,14609720-146098... 29 1.7
10_03_0046 + 7357777-7357992 29 2.3
07_03_0730 + 21030123-21030338 29 2.3
04_01_0527 - 6913266-6913802 29 2.3
01_06_1064 + 34237919-34238155 29 2.3
08_02_1015 - 23597445-23597628,23597654-23597877 29 3.0
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 4.0
06_01_1114 - 9179614-9180167,9180223-9180544,9181524-9181820,918... 28 5.2
05_06_0098 + 25560158-25560925 28 5.2
04_04_0928 + 29472658-29472772,29473198-29473304,29473441-29473497 28 5.2
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 5.2
02_02_0442 - 10318576-10319109 28 5.2
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858 28 5.2
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 27 6.9
12_02_1245 - 27308143-27308787,27308923-27308983,27309064-273094... 27 9.1
11_01_0719 - 5924088-5924362,5924458-5924605 27 9.1
10_07_0005 - 11744073-11745653 27 9.1
02_01_0530 - 3853274-3853666 27 9.1
01_05_0138 + 18516689-18518161 27 9.1
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 147 bits (356), Expect = 5e-36
Identities = 75/145 (51%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Frame = +1
Query: 52 ALKPAALAVQNGAKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP 228
+L +A V + +S+ S Q K IGQPL+LL+K NPLV+ L+LYDIA
Sbjct: 4 SLMRSASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAG 63
Query: 229 VTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNAS 408
TPGVAAD+SH+N PA+V G G ++L A++ +D+V+IPAGVPRKPGMTRDDLFN NA
Sbjct: 64 -TPGVAADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAG 122
Query: 409 IVRDIALSIAQNAPKAIVAIITNPV 483
IV+++ +IA+ P A+V +I+NPV
Sbjct: 123 IVKNLCTAIAKYCPNALVNMISNPV 147
>08_02_0774 - 21047696-21048889
Length = 397
Score = 146 bits (354), Expect = 9e-36
Identities = 76/133 (57%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Frame = +1
Query: 88 AKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHM 264
AK+ S S + ++K IGQPL LL+K +PLV+ L LYDIA V GVAADLSH
Sbjct: 64 AKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVK-GVAADLSHC 122
Query: 265 NTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQN 444
NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASIV+ + ++A N
Sbjct: 123 NTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADN 182
Query: 445 APKAIVAIITNPV 483
P+A + II+NPV
Sbjct: 183 CPEAFIHIISNPV 195
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 146 bits (353), Expect = 1e-35
Identities = 70/110 (63%), Positives = 89/110 (80%)
Frame = +1
Query: 154 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 333
IGQPLALL+K NPLV+ L+LYDIA TPGVAAD+SH+N+PA V G G E+L A++ +D
Sbjct: 38 IGQPLALLMKLNPLVSSLSLYDIAG-TPGVAADVSHINSPALVKGFVGEEQLGEALEGSD 96
Query: 334 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPV 483
VV+IPAGVPRKPGMTRDDLFN NA IV+ + +I++ P A+V +I+NPV
Sbjct: 97 VVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNPV 146
>01_06_1220 + 35493575-35494765
Length = 396
Score = 145 bits (352), Expect = 2e-35
Identities = 75/144 (52%), Positives = 96/144 (66%)
Frame = +1
Query: 52 ALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPV 231
++ P + N + S + ++K IGQPL LL+K +PLV+ L LYDIA V
Sbjct: 55 SISPRIVPKANSGSHISP--EASYKVAVLGAAGGIGQPLGLLIKMSPLVSALHLYDIANV 112
Query: 232 TPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASI 411
GVAADLSH NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASI
Sbjct: 113 K-GVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASI 171
Query: 412 VRDIALSIAQNAPKAIVAIITNPV 483
V+ + ++A N P+A + II+NPV
Sbjct: 172 VKTLVEAVADNCPEAFIHIISNPV 195
>07_03_1371 - 26100553-26101767
Length = 404
Score = 143 bits (346), Expect = 9e-35
Identities = 70/110 (63%), Positives = 85/110 (77%)
Frame = +1
Query: 154 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 333
IGQPL+LL+K +PLV+ L LYDIA V GV ADL H NTPAKV+G G EEL+ + D
Sbjct: 89 IGQPLSLLVKMSPLVSALHLYDIANVD-GVTADLGHCNTPAKVAGFTGKEELAGCLAGVD 147
Query: 334 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNPV 483
VVVIPAGVPRKPGMTRDDLF NA IVR++ ++A +AP A+V +I+NPV
Sbjct: 148 VVVIPAGVPRKPGMTRDDLFGINAGIVRELVEAVADHAPAALVHVISNPV 197
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 138 bits (335), Expect = 2e-33
Identities = 69/121 (57%), Positives = 85/121 (70%)
Frame = +1
Query: 121 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGP 300
FK IGQPL+LL+K NPLV+ L LYD+ TPGV AD+SHM+T A V G GP
Sbjct: 43 FKVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVN-TPGVTADVSHMDTTAVVRGFLGP 101
Query: 301 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNP 480
+L AA+ D+V+IPAG+PRKPGMTRDDLFN NA IVR + +A+ P AIV +I+NP
Sbjct: 102 NQLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIVNLISNP 161
Query: 481 V 483
V
Sbjct: 162 V 162
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 138 bits (334), Expect = 2e-33
Identities = 71/121 (58%), Positives = 83/121 (68%)
Frame = +1
Query: 121 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGP 300
FK IGQPLALL+K NPLV+ L LYD+ TPGV AD+SHMNT A V G G
Sbjct: 58 FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVN-TPGVTADISHMNTGAVVRGFLGQ 116
Query: 301 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVAIITNP 480
+L A+ D+V+IPAGVPRKPGMTRDDLFN NA IVR + IA+ P AIV +I+NP
Sbjct: 117 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNP 176
Query: 481 V 483
V
Sbjct: 177 V 177
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 103 TTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP-VTPGVAADLSHMNTPAK 279
T+ +R +G +A + + +AL D P G DL H
Sbjct: 33 TSHRRRLTKISVIGAGNVGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLP 92
Query: 280 VSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAI 459
+L A + +D+ ++ AG + PG +R +L N ++ R I ++A+++P+A+
Sbjct: 93 RVRLVSDTDL-AVTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEAL 151
Query: 460 VAIITNPV 483
+ I++NPV
Sbjct: 152 LLIVSNPV 159
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 322 KDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAI-VAIITNPVXLYSA 498
+DA+ ++ PR PGM R L + N I + ++ A + + V ++ NP +
Sbjct: 148 EDAEWALLIGAKPRGPGMERSALLDINGQIFAEQGKALNSVASRNVKVIVVGNPCNTNAL 207
Query: 499 YCL*SA 516
CL +A
Sbjct: 208 ICLKNA 213
>04_04_0587 + 26410808-26411338
Length = 176
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 220 CRIKPAWSPEDSASVEGPKAGRYHRRHQRP 131
CR KPA SP A++ P GR RR +RP
Sbjct: 3 CRAKPASSPPSRAALAAP--GRCRRRRRRP 30
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 154 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAK--VSGHK-GPEELSAAIK 324
IG+ + + +T + + D AP P AA L V G G + L AAIK
Sbjct: 20 IGRYIVAASAREDHLTSVLVRDPAPADPAKAAVLQGFRDSGATLVKGDLYGHQSLVAAIK 79
Query: 325 DADVVVIPAGVPRKPGMTR 381
ADVV+ G + TR
Sbjct: 80 SADVVISAVGYAQLADQTR 98
>10_06_0120 -
10979458-10979665,10979909-10980585,10981315-10981538,
10981763-10982136,10982203-10982786
Length = 688
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 276 QGQRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 377
Q +RPQGT A+ SH C CS+ S GND
Sbjct: 268 QEKRPQGTVKALDSHVTCEVCSNTGHS----GND 297
>05_04_0057 + 17543016-17543312
Length = 98
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 59 NLPPLLYKMVQRTFPPHHRGTLKWWSLVP 145
++P L+ V R PP RG +WW L P
Sbjct: 39 SVPSLVEVEVDRCGPPGRRGGRRWWLLCP 67
>05_03_0485 +
14608663-14608989,14609265-14609535,14609720-14609830,
14609870-14610423
Length = 420
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 282 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 377
+RPQGT A+ SH C C H S GND
Sbjct: 137 KRPQGTVQALDSHVTCEVCDHTGHS----GND 164
>10_03_0046 + 7357777-7357992
Length = 71
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 129 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 212
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>07_03_0730 + 21030123-21030338
Length = 71
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 129 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 212
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>04_01_0527 - 6913266-6913802
Length = 178
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -2
Query: 304 PQVPCGR*PWLGCSCGKG---RLRRRGSQALCRIKPA--WSPEDSASVEGPKAGRYHRRH 140
P++ C + + S G R RRR + CR P SPE S + HRRH
Sbjct: 79 PRLLCAKADTIAVSARLGHPVRRRRRAHRRQCRPSPPPPLSPEPSTAAVAEPPAAAHRRH 138
Query: 139 Q 137
Q
Sbjct: 139 Q 139
>01_06_1064 + 34237919-34238155
Length = 78
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 129 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 212
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>08_02_1015 - 23597445-23597628,23597654-23597877
Length = 135
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 205 AWSPEDSASVEGPKAGRYHRRHQRPPL*SSSVMW 104
AW+ ED+A + + G + RPP SS V W
Sbjct: 2 AWTVEDAAISDELRRGAWMTERTRPPPLSSDVAW 35
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 282 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 377
+RPQGT A+ SH C CS ST +GND
Sbjct: 152 KRPQGTVKALDSHVTCEVCS----STGHSGND 179
>06_01_1114 -
9179614-9180167,9180223-9180544,9181524-9181820,
9181991-9182878,9182896-9182941,9182964-9183350,
9183648-9183985
Length = 943
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 282 QRPQGT*GAISSHQRC*CCSHPSRS 356
+RPQGT A+ SH C C + S S
Sbjct: 198 KRPQGTVKALDSHVTCEVCGNTSHS 222
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 187 NPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRK 366
+P V ++PVTP VA + +PA S PEE +AAI + P+ +
Sbjct: 163 SPSVLDFPSLALSPVTPLVADPFNR--SPASASSSASPEEEAAAIAQKGFFLHPSPRSAE 220
Query: 367 P 369
P
Sbjct: 221 P 221
>04_04_0928 + 29472658-29472772,29473198-29473304,29473441-29473497
Length = 92
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 338 TTSASLMAADSSSGPLWPLTLAGVFMWERSAATPGVTGAMSY 213
T S SL A+ SSS PL P+ + + ER A P +SY
Sbjct: 17 TISVSLAASPSSSHPLRPVASSVNLVMERVAKRPRGFAFLSY 58
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 189 SSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQR 287
+S D A F HS+C R P P QGQR
Sbjct: 985 ASPDAAAFAVHSSCSRALRMGPKPFAGTPQGQR 1017
>02_02_0442 - 10318576-10319109
Length = 177
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -2
Query: 304 PQVPCGR*PWLGCSCGKG---RLRRRGSQALCRIKP--AWSPEDSASVEGPKAGRYHRRH 140
P++ C + + S G R RRR + R P + SPE S + G HRRH
Sbjct: 78 PRLLCAKADTIAASARLGHPVRRRRRAHRRRRRPSPPPSLSPEPSTAAVGEPPAAAHRRH 137
Query: 139 Q 137
Q
Sbjct: 138 Q 138
>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
Length = 275
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 217 RIKPAWSPEDSASVEGPKAGRYHRRHQR 134
R+ PAW+PE+ A +E G Y RH R
Sbjct: 109 RLSPAWTPEEDACLERLARG-YGFRHWR 135
>03_02_0067 +
5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 335 TSASLMAADSSSGPLWPLTL--AGVFMWERSAATPGVTGAMSYKASLVTRGFCFSRRAK 165
TS + M SS + LTL G W R+ V + ++SLVTR F +RA+
Sbjct: 633 TSINSMPEGQSSRCIEELTLDLTGTLKWMRTCGLLDVKLEVQGESSLVTRDSVFGQRAE 691
>12_02_1245 -
27308143-27308787,27308923-27308983,27309064-27309440,
27309657-27310517
Length = 647
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 295 GPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 432
G L+ ++ + ++P P PG+ DD++N A + +A S
Sbjct: 577 GNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASS 622
>11_01_0719 - 5924088-5924362,5924458-5924605
Length = 140
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 205 LALYDIAPVTPGVAADLSHMNTPAKVSG 288
L L +AP+ PG D H + PA +G
Sbjct: 8 LVLVLLAPLLPGTTGDQQHAHLPAAAAG 35
>10_07_0005 - 11744073-11745653
Length = 526
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 226 PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIP 348
PV P V+ PA+ + P+ +AA++D V++P
Sbjct: 61 PVHPTVSPGFLRHRLPAEPPSRREPDAFAAAMQDVRDVILP 101
>02_01_0530 - 3853274-3853666
Length = 130
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 268 CSCGKGRL--RRRGSQALCRIKPA 203
C CG GRL R R ALC +PA
Sbjct: 26 CGCGLGRLVRRLRRQAALCAARPA 49
>01_05_0138 + 18516689-18518161
Length = 490
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 301 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVA 465
E L A + + V +P+ V + TR T +I+R +ALS A N+ + A
Sbjct: 117 EHLVANVHSGETVSLPSRVVSQVTCTRK---TTTVAIIRAVALSAAPNSAGCLAA 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,093,490
Number of Sequences: 37544
Number of extensions: 388271
Number of successful extensions: 1338
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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