Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS332A07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.62 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.62 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = +2

Query: 263  QHLKGVELVAEMCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCA 442
            QH+K       +CQA  NG  I S   +    K+    Y A      ++       L C 
Sbjct: 774  QHVKEDREGFYLCQAS-NG--IGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCE 830

Query: 443  VMADGPVTLE-LKGGTNAEMAPQIDY 517
            V  D PVT+  LKGG   E+ P  +Y
Sbjct: 831  VHGDTPVTVTWLKGG-KIELNPSTNY 855


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = +2

Query: 263  QHLKGVELVAEMCQAKLNGAHIRSTQLEFKPGKIRGGHYVADTRTAGSISLLLQVALPCA 442
            QH+K       +CQA  NG  I S   +    K+    Y A      ++       L C 
Sbjct: 770  QHVKEDREGFYLCQAS-NG--IGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATLHCE 826

Query: 443  VMADGPVTLE-LKGGTNAEMAPQIDY 517
            V  D PVT+  LKGG   E+ P  +Y
Sbjct: 827  VHGDTPVTVTWLKGG-KIELNPSTNY 851


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 315 MVLIFGQHNWSSNLE 359
           + ++ G+H+WSS  E
Sbjct: 213 LAIVVGEHDWSSKTE 227


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 255 WHPNI*KV*S**QKCVKPNSMVLIFGQHNWSSNLER 362
           WHP   K+ +   K V P + V +FG   WS   ER
Sbjct: 148 WHPG--KIVN--GKRVPPTNWVGVFGGSAWSWREER 179


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 255 WHPNI*KV*S**QKCVKPNSMVLIFGQHNWSSNLER 362
           WHP   K+ +   K V P + V +FG   WS   ER
Sbjct: 148 WHPG--KIVN--GKRVPPTNWVGVFGGSAWSWREER 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,636
Number of Sequences: 438
Number of extensions: 3035
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)