Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331H06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41...    32   0.24 
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238...    29   3.0  
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788...    28   5.2  
03_02_0793 + 11240685-11240990                                         28   5.2  
03_06_0623 + 35160081-35160210,35160299-35161032,35161111-351615...    27   6.9  
01_05_0264 + 20168409-20168593,20168726-20169055,20170142-201706...    27   6.9  
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42...    27   9.1  

>09_01_0020 +
           413723-413738,413867-413934,414849-415144,415275-415400,
           415484-415566,416514-416628,416755-416847,416963-417021,
           417609-417684,417812-417901,418050-418202,418294-418480,
           418752-418839,419077-419125,419233-419329
          Length = 531

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = +3

Query: 99  FWGLIMEPNKRYTQ-VVEKPFHISQAAMDTSTGDNEPCQXXXXXXXXXXXXCTLQKNKCI 275
           FWGL ++P + YT         I+QA + +        Q            C L     +
Sbjct: 4   FWGLELKPGEAYTHHSAPARLRITQAVLGSCDQGWTTLQCDTNDRETVRL-CVLNPGLAV 62

Query: 276 QVPLDLYFKTGDSIAFLTNGKCNVHLTGY 362
              L+L  +  +++    +G+ ++HL+GY
Sbjct: 63  ACHLELELQKDENVLLSVDGQNSIHLSGY 91


>01_01_0292 -
           2387653-2387711,2388061-2388684,2388814-2389104,
           2389338-2389390,2390496-2390968,2391090-2391432,
           2391793-2391911,2392081-2392512,2392657-2392747,
           2392833-2392942,2393681-2393875,2394581-2394622,
           2395144-2395268,2395856-2395926,2396047-2396147
          Length = 1042

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = +3

Query: 63  LVIYASDLTINMFWGLIMEPNKRYTQVVEKPFHISQAAMDTSTGDNEP 206
           +VI     T  + W    EP   +  +V++P H S     T  GD +P
Sbjct: 22  IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRSSGETVTVVGDTDP 69


>03_06_0209 - 32377045-32378008,32378086-32378210,32378772-32378816,
            32379009-32379295,32379778-32381509,32381631-32381971,
            32383753-32383876,32384484-32384722,32385156-32385534
          Length = 1411

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -3

Query: 270  ICFSGECTRXSXFHQQQPSLDMAHYHQLMCP 178
            ICFSG     + F    P  D   +H   CP
Sbjct: 947  ICFSGATNGENDFESGLPEFDPVKHHNSYCP 977


>03_02_0793 + 11240685-11240990
          Length = 101

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 186 MCP*QPVKCGTASPPLGCTVCWVPLLIP 103
           MC   P   G ++PP  C++C   +L+P
Sbjct: 1   MCSMPPALTGGSAPPSSCSLCQAIVLLP 28


>03_06_0623 +
           35160081-35160210,35160299-35161032,35161111-35161572,
           35161654-35162486,35162569-35162739,35162819-35163119
          Length = 876

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 90  INMFWGLIMEPNKRYTQVVEKPFHISQAAMDTSTGD 197
           +NM WGL +E   R+ +   K +H ++ A     GD
Sbjct: 812 LNMAWGLYVEKGGRHKEGKNKLYHDTKFACAQQIGD 847


>01_05_0264 +
           20168409-20168593,20168726-20169055,20170142-20170670,
           20170825-20170958,20171080-20171252,20171274-20171840,
           20172487-20172716,20172954-20172995,20173096-20173224
          Length = 772

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 127 NGTPKWWRSRSTFHRLLW 180
           NG+P+ W+  +T+H+L W
Sbjct: 562 NGSPEVWKWLTTYHKLKW 579


>09_01_0022 +
           426649-426663,427170-427420,427479-427577,428321-428473,
           428893-429051,429146-429287,429460-429544,429629-429670,
           429784-429832,430540-430639,431240-431287
          Length = 380

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 282 PLDLYFKTGDSIAFLTNGKCNVHLTGY 362
           PL+L F+   ++     G+ +VHL+GY
Sbjct: 43  PLELEFEENKNVVLSVRGQNSVHLSGY 69


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,200,778
Number of Sequences: 37544
Number of extensions: 206101
Number of successful extensions: 486
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)