Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331H04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0001 - 11373469-11373862,11374072-11374264,11374414-113744...    27   9.1  

>09_03_0001 -
           11373469-11373862,11374072-11374264,11374414-11374482,
           11374858-11374984,11375223-11375485,11375697-11375785,
           11375832-11375909,11376070-11376141,11376234-11376372,
           11378857-11379323,11380781-11381345,11382553-11382622
          Length = 841

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 297 QLFFLSPFDYSIIFLTDFYNYLRTIMILKLFYGLNQN 187
           +++FL  +D +  F  DF     TIM +KL YG+ +N
Sbjct: 351 EIYFLITYDGTTTFSKDF----DTIMAIKLEYGVKKN 383


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,048,415
Number of Sequences: 37544
Number of extensions: 153515
Number of successful extensions: 259
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)