Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331H01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13642-6|AAG00038.1|  175|Caenorhabditis elegans Hypothetical pr...    76   1e-14
Z49908-1|CAA90093.1|  816|Caenorhabditis elegans Hypothetical pr...    32   0.29 
DQ342049-1|ABC69941.1|  830|Caenorhabditis elegans STIP protein.       32   0.29 
Z95619-4|CAB09113.2|  397|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z81482-1|CAB03953.2|  208|Caenorhabditis elegans Hypothetical pr...    28   3.5  
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.        28   3.5  
AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical...    28   3.5  
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical...    28   3.5  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AC006720-4|AAF60448.1|  330|Caenorhabditis elegans Hypothetical ...    27   6.2  
AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U13642-6|AAG00038.1|  175|Caenorhabditis elegans Hypothetical
           protein ZC395.10 protein.
          Length = 175

 Score = 76.2 bits (179), Expect = 1e-14
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
 Frame = +3

Query: 63  PSVSWAQRNARIFLTFNV-ECEKPDINIEPKSITFKGICEPEKKMHEVLIPLYAEVDPKK 239
           P+V WAQR + ++LT  V E +  ++  E   + F+G  + +K  +E  +  + E+DP  
Sbjct: 5   PTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQGSSKTDK--YEATLEFFDEIDPAS 62

Query: 240 SMWVNKG-RLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDEDESGDDLD 404
                   R++E+ + K+     +WP L  +K K HWLKVDF +W+DEDE  +  D
Sbjct: 63  VKHTGSSTRVVEITVQKKT--PAWWPRLLQNKGKVHWLKVDFGKWKDEDEDDEAED 116


>Z49908-1|CAA90093.1|  816|Caenorhabditis elegans Hypothetical
           protein C07E3.1a protein.
          Length = 816

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +3

Query: 177 EPEKKMHEVLIPLYAEVDPKKSMWVNKGRLIEVLLAK--EKVDEPYWPSLTSDKKKHHWL 350
           +P  +MHE +I L  +  P  S W+ +  L ++++ K  E+V++  W  +T +   H WL
Sbjct: 488 DPSTQMHE-MIELVEQWIPLLSAWITENILEQLVVPKIAERVNQ--WDPMTDEIPIHEWL 544


>DQ342049-1|ABC69941.1|  830|Caenorhabditis elegans STIP protein.
          Length = 830

 Score = 31.9 bits (69), Expect = 0.29
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +3

Query: 177 EPEKKMHEVLIPLYAEVDPKKSMWVNKGRLIEVLLAK--EKVDEPYWPSLTSDKKKHHWL 350
           +P  +MHE +I L  +  P  S W+ +  L ++++ K  E+V++  W  +T +   H WL
Sbjct: 502 DPSTQMHE-MIELVEQWIPLLSAWITENILEQLVVPKIAERVNQ--WDPMTDEIPIHEWL 558


>Z95619-4|CAB09113.2|  397|Caenorhabditis elegans Hypothetical
           protein H21P03.2 protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 19/75 (25%), Positives = 37/75 (49%)
 Frame = +3

Query: 204 LIPLYAEVDPKKSMWVNKGRLIEVLLAKEKVDEPYWPSLTSDKKKHHWLKVDFNRWQDED 383
           L+ L  +   +  + +N G +I+ + A  K+ +     + +  K H    VD + W DE 
Sbjct: 105 LLELVGQTTRETLLEINGGAVIDPVDAGNKIGDAL-KQIETSVKAH---TVDKSNWCDEW 160

Query: 384 ESGDDLDNMNDMFSD 428
              D++D +N+M+ D
Sbjct: 161 IVDDNMDEINEMYDD 175


>Z81482-1|CAB03953.2|  208|Caenorhabditis elegans Hypothetical
           protein C40H5.2 protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +3

Query: 273 VLLAKEK--VDEPYWPSLTSDKKKHHWLKVD--FNRWQDEDESGDDLDNMN 413
           V + KE+  + + +W S +S+K   +    +  +NRW +ED+  DDL   N
Sbjct: 123 VRMRKERRGLTQVFWESASSNKMGFYISVPNKHYNRWAEEDDMFDDLPTEN 173


>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
          Length = 2553

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 KPDINIEPKSITFKG--ICEPEKKMHEVLIPLYA----EVDPKKSMWVNKGRLIEVLLAK 287
           K  +  EP ++ +    +   +  MH+V    Y     + +P KS+W++ GR  E  L +
Sbjct: 16  KKTMQFEPSTLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTFEHYLVR 75

Query: 288 EKVDEPY 308
            K +  Y
Sbjct: 76  NKDEIEY 82


>AC025726-18|AAK73910.1|  996|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11b protein.
          Length = 996

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 KPDINIEPKSITFKG--ICEPEKKMHEVLIPLYA----EVDPKKSMWVNKGRLIEVLLAK 287
           K  +  EP ++ +    +   +  MH+V    Y     + +P KS+W++ GR  E  L +
Sbjct: 16  KKTMQFEPSTLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTFEHYLVR 75

Query: 288 EKVDEPY 308
            K +  Y
Sbjct: 76  NKDEIEY 82


>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
           protein Y71G12B.11a protein.
          Length = 2553

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 KPDINIEPKSITFKG--ICEPEKKMHEVLIPLYA----EVDPKKSMWVNKGRLIEVLLAK 287
           K  +  EP ++ +    +   +  MH+V    Y     + +P KS+W++ GR  E  L +
Sbjct: 16  KKTMQFEPSTLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTFEHYLVR 75

Query: 288 EKVDEPY 308
            K +  Y
Sbjct: 76  NKDEIEY 82


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
           protein B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 139 TLNLNRLRSKEYANQKKKC 195
           T+N+++L  KEY   KKKC
Sbjct: 769 TVNVDKLSDKEYKEYKKKC 787


>AC006720-4|AAF60448.1|  330|Caenorhabditis elegans Hypothetical
           protein Y17G9B.7 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
 Frame = +3

Query: 177 EPEKKMHEVLIPLYAEVDPK---KSMWVNKGRLIEVLLAKEKVDE--PYWPSLTSDKKKH 341
           EP K+M  +L      V  K     ++V   R     L  E V+    +W   +  K K 
Sbjct: 189 EPSKQMQMILTRNMNVVSTKCDLNDVFVTNARSFTAFLKIEDVNIFLKHWMHRSDRKLKS 248

Query: 342 HWLKVDFNRWQDED 383
            W  +D  RW  ED
Sbjct: 249 AWFDLDAFRWDVED 262


>AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5a protein.
          Length = 599

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 93  RIFLTFNVECEKPDINIEPKSI-TFKGICEPEKKMHEVLI 209
           R+F + NVE E  D N++ + + T    C  EK ++ V+I
Sbjct: 535 RLFDSVNVELENRDSNVKTEQLSTSPETCSEEKHLYIVVI 574


>AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5b protein.
          Length = 601

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 93  RIFLTFNVECEKPDINIEPKSI-TFKGICEPEKKMHEVLI 209
           R+F + NVE E  D N++ + + T    C  EK ++ V+I
Sbjct: 537 RLFDSVNVELENRDSNVKTEQLSTSPETCSEEKHLYIVVI 576


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,649,668
Number of Sequences: 27780
Number of extensions: 224837
Number of successful extensions: 689
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)