Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331F10f
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein. 83 3e-16
U80776-1|AAC52012.1| 671|Homo sapiens unknown protein. 74 1e-13
DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein. 74 1e-13
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 74 1e-13
AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein. 74 1e-13
AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner ... 74 1e-13
AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein. 74 1e-13
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 55 5e-08
BX538098-1|CAD98014.1| 399|Homo sapiens hypothetical protein pr... 28 9.3
>U52077-1|AAC52010.1| 343|Homo sapiens mariner transposase protein.
Length = 343
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = +3
Query: 171 PRLMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
P L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL+PTDYHFF+ L+ F
Sbjct: 234 PALVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLSPTDYHFFKHLDNF 292
Score = 51.6 bits (118), Expect = 7e-07
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VTVWWS G++HY+FL G+ IT+
Sbjct: 177 PKHFPKPNLHQKKVMVTVWWSAAGLIHYSFLNPGETITS 215
>U80776-1|AAC52012.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 177 LMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL PT+YH F+ L F
Sbjct: 564 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNF 620
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VT+WWS G++HY+FL G+ IT+
Sbjct: 505 PKHFPKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITS 543
>DQ341316-1|ABC72087.1| 344|Homo sapiens SETMAR protein.
Length = 344
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 177 LMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL PT+YH F+ L F
Sbjct: 237 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNF 293
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VT+WWS G++HY+FL G+ IT+
Sbjct: 178 PKHFPKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITS 216
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 177 LMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL PT+YH F+ L F
Sbjct: 322 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNF 378
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VT+WWS G++HY+FL G+ IT+
Sbjct: 263 PKHFPKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITS 301
>AY952295-1|AAY29570.1| 671|Homo sapiens metnase protein.
Length = 671
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 177 LMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL PT+YH F+ L F
Sbjct: 564 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNF 620
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VT+WWS G++HY+FL G+ IT+
Sbjct: 505 PKHFPKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITS 543
>AK222734-1|BAD96454.1| 671|Homo sapiens SET domain and mariner
transposase fusion gene variant protein.
Length = 671
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 177 LMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL PT+YH F+ L F
Sbjct: 564 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNF 620
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VT+WWS G++HY+FL G+ IT+
Sbjct: 505 PKHFPKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITS 543
>AF054989-1|AAC09350.1| 671|Homo sapiens unknown protein.
Length = 671
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 177 LMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLEXF 347
L+NR P+LLHDNARPH A+ T+ L EL +++ H PYS DL PT+YH F+ L F
Sbjct: 564 LVNRKGPILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNF 620
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 1 PQQCPKAKLTNKKIIVTVWWSQHGVMHYNFLRSGQGITA 117
P+ PK L KK++VT+WWS G++HY+FL G+ IT+
Sbjct: 505 PKHFPKPILHPKKVMVTIWWSAAGLIHYSFLNPGETITS 543
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 141 KDSKTCNEK*PRLMNRSSPLLLHDNARPHTARETVLTLQELQLDIIRHAPYSLDLAPTDY 320
K +K EK P +++ LL HDNA H++ +T L+E + +IIRH PYS DLAP+D+
Sbjct: 232 KLAKALAEKRPGKLHQRV-LLHHDNAPAHSSHQTRAILREFRWEIIRHPPYSPDLAPSDF 290
Query: 321 HFFRDLE 341
F +L+
Sbjct: 291 FLFPNLK 297
>BX538098-1|CAD98014.1| 399|Homo sapiens hypothetical protein
protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 240 TVLTLQELQLDIIRHAPYSLDLAPTDYHFFRDLE 341
TVLTLQ +L +RH + L LAP +++ + LE
Sbjct: 1 TVLTLQGSELRALRH--HELVLAPPEFNSLQSLE 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,447,431
Number of Sequences: 237096
Number of extensions: 949422
Number of successful extensions: 2416
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2416
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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