Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   1.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   1.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   5.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   5.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.7  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 140 CKNNCEKYISLYQHSVVVMATLIQENGIK--ELSKGTHG 250
           C N C +YIS  +  + +   + + +G K  EL+  T+G
Sbjct: 12  CDNFCHRYISCLKGKMPIDLVIDERDGGKPPELTGSTNG 50


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 140 CKNNCEKYISLYQHSVVVMATLIQENGIK--ELSKGTHG 250
           C N C +YIS  +  + +   + + +G K  EL+  T+G
Sbjct: 168 CDNFCHRYISCLKGKMPIDLVIDERDGGKPPELTGSTNG 206


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 475 SQVQVALXTKTAHDIVYHDINFWSLLF 395
           S   + L      D + +  NFW++LF
Sbjct: 50  SYTYIKLVVSVLMDFIAYFFNFWTILF 76


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 335 SVRSSRNIHGLAPYVL 288
           S+    NIHG+AP V+
Sbjct: 229 SLPPGNNIHGMAPSVM 244


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 335 SVRSSRNIHGLAPYVL 288
           S+    NIHG+AP V+
Sbjct: 177 SLPPGNNIHGMAPSVM 192


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 335 SVRSSRNIHGLAPYVL 288
           S+    NIHG+AP V+
Sbjct: 360 SLPPGNNIHGMAPSVM 375


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 39  YSQKLCGHLKLKQRSCAIKWT 101
           Y+Q   GHL+ K       WT
Sbjct: 32  YAQPPIGHLRFKAPQAPQPWT 52


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 39  YSQKLCGHLKLKQRSCAIKWT 101
           Y+Q   GHL+ K       WT
Sbjct: 34  YAQPPIGHLRFKAPQAPQPWT 54


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 39  YSQKLCGHLKLKQRSCAIKWT 101
           Y+Q   GHL+ K       WT
Sbjct: 32  YAQPPIGHLRFKAPQAPQPWT 52


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 39  YSQKLCGHLKLKQRSCAIKWT 101
           Y+Q   GHL+ K       WT
Sbjct: 34  YAQPPIGHLRFKAPQAPQPWT 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,518
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)