Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F06f
         (393 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...   149   1e-36
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...   149   1e-36
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...   149   2e-36
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    31   0.72 
AY122185-1|AAM52697.1|  310|Drosophila melanogaster LD42289p pro...    29   1.7  
AE014134-1700|AAF52815.1|  304|Drosophila melanogaster CG4036-PA...    29   1.7  

>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score =  149 bits (362), Expect = 1e-36
 Identities = 78/118 (66%), Positives = 86/118 (72%)
 Frame = +2

Query: 2   CSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKM 181
           CSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV HQK 
Sbjct: 6   CSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMHQKQ 65

Query: 182 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 355
           K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 66  KENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score =  149 bits (362), Expect = 1e-36
 Identities = 78/118 (66%), Positives = 86/118 (72%)
 Frame = +2

Query: 2   CSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKM 181
           CSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV HQK 
Sbjct: 6   CSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMHQKQ 65

Query: 182 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 355
           K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 66  KENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score =  149 bits (360), Expect = 2e-36
 Identities = 78/118 (66%), Positives = 86/118 (72%)
 Frame = +2

Query: 2   CSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKM 181
           CSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV HQK 
Sbjct: 6   CSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIVMHQKQ 65

Query: 182 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 355
           K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVKA
Sbjct: 66  KENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVKA 123


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 361 YSSFNGIDSRWEERFLSDLFPRLDLCFV 278
           Y++F   + +W +  + D+F RL LCFV
Sbjct: 46  YTTFFDDNIQWSQMVIKDIFQRLQLCFV 73


>AY122185-1|AAM52697.1|  310|Drosophila melanogaster LD42289p
           protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +1

Query: 127 PCCKKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEER 306
           PC  K  RTCL C       ++    Q Q+++A+ +  Q D    Q  + T    +D E 
Sbjct: 12  PCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCD--LLQRGWDTNHVQKDHEN 69

Query: 307 DQKEISLP 330
            +K+  LP
Sbjct: 70  HKKDEGLP 77


>AE014134-1700|AAF52815.1|  304|Drosophila melanogaster CG4036-PA
           protein.
          Length = 304

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +1

Query: 127 PCCKKSYRTCLHCVSPEDEGQS*KPLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQDEER 306
           PC  K  RTCL C       ++    Q Q+++A+ +  Q D    Q  + T    +D E 
Sbjct: 6   PCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCD--LLQRGWDTNHVQKDHEN 63

Query: 307 DQKEISLP 330
            +K+  LP
Sbjct: 64  HKKDEGLP 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,584,801
Number of Sequences: 53049
Number of extensions: 201813
Number of successful extensions: 948
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)