Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F04f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068566-1|AAH68566.1|  555|Homo sapiens F-box protein 33 protein.     31   3.2  
BC053537-1|AAH53537.1|  555|Homo sapiens F-box protein 33 protein.     31   3.2  
BC042535-1|AAH42535.1|  160|Homo sapiens FBXO33 protein protein.       31   3.2  
M63962-1|AAA35988.1| 1035|Homo sapiens H,K-ATPase catalytic subu...    29   7.5  
J05451-1|AAA51010.1| 1035|Homo sapiens H+,K+-ATPase protein.           29   7.5  
BC041583-1|AAH41583.1|  249|Homo sapiens RUN domain containing 2...    29   7.5  
AD000090-1|AAB50172.1| 1035|Homo sapiens human gastric H,K-ATPas...    29   7.5  

>BC068566-1|AAH68566.1|  555|Homo sapiens F-box protein 33 protein.
          Length = 555

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 178 LKRWRCS*E*SLLAVDGYIV*ASRRVTLSRSRGCNI 71
           L  WRC+ + SLLA+ GY V A   + ++R RG ++
Sbjct: 451 LLAWRCT-KLSLLAIHGYTVWAHNLIAIARLRGSDL 485


>BC053537-1|AAH53537.1|  555|Homo sapiens F-box protein 33 protein.
          Length = 555

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 178 LKRWRCS*E*SLLAVDGYIV*ASRRVTLSRSRGCNI 71
           L  WRC+ + SLLA+ GY V A   + ++R RG ++
Sbjct: 451 LLAWRCT-KLSLLAIHGYTVWAHNLIAIARLRGSDL 485


>BC042535-1|AAH42535.1|  160|Homo sapiens FBXO33 protein protein.
          Length = 160

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 178 LKRWRCS*E*SLLAVDGYIV*ASRRVTLSRSRGCNI 71
           L  WRC+ + SLLA+ GY V A   + ++R RG ++
Sbjct: 56  LLAWRCT-KLSLLAIHGYTVWAHNLIAIARLRGSDL 90


>M63962-1|AAA35988.1| 1035|Homo sapiens H,K-ATPase catalytic subunit
           protein.
          Length = 1035

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
 Frame = -3

Query: 414 PFLAPDTLELSFHRLDDATD-------SGRPPRK*L*FGSISSNSGSVPLSRMFSRMSSI 256
           PF + +  +LS H L+D  D        G P R      SI      +PL   +      
Sbjct: 492 PFNSTNKFQLSIHTLEDPRDPRHLLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQT 551

Query: 255 SVLF--GAGSAALGSCRASKLRRSFPPL*NDGVVAENDPS 142
           + L   G G   LG C+     + +PP     V A N PS
Sbjct: 552 AYLSLGGLGERVLGFCQLYLNEKDYPPGYAFDVEAMNFPS 591


>J05451-1|AAA51010.1| 1035|Homo sapiens H+,K+-ATPase protein.
          Length = 1035

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
 Frame = -3

Query: 414 PFLAPDTLELSFHRLDDATD-------SGRPPRK*L*FGSISSNSGSVPLSRMFSRMSSI 256
           PF + +  +LS H L+D  D        G P R      SI      +PL   +      
Sbjct: 492 PFNSTNKFQLSIHTLEDPRDPRHLLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQT 551

Query: 255 SVLF--GAGSAALGSCRASKLRRSFPPL*NDGVVAENDPS 142
           + L   G G   LG C+     + +PP     V A N PS
Sbjct: 552 AYLSLGGLGERVLGFCQLYLNEKDYPPGYAFDVEAMNFPS 591


>BC041583-1|AAH41583.1|  249|Homo sapiens RUN domain containing 2B
           protein.
          Length = 249

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 208 SSAGTKSRGSRSK*HRNGRHS-TEHATQWH 294
           +S+G K RG      +NG HS T+   QWH
Sbjct: 207 NSSGRKHRGHSESPEKNGAHSVTQAGVQWH 236


>AD000090-1|AAB50172.1| 1035|Homo sapiens human gastric H,K-ATPase
           catalytic subunit protein.
          Length = 1035

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
 Frame = -3

Query: 414 PFLAPDTLELSFHRLDDATD-------SGRPPRK*L*FGSISSNSGSVPLSRMFSRMSSI 256
           PF + +  +LS H L+D  D        G P R      SI      +PL   +      
Sbjct: 492 PFNSTNKFQLSIHTLEDPRDPRHLLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQT 551

Query: 255 SVLF--GAGSAALGSCRASKLRRSFPPL*NDGVVAENDPS 142
           + L   G G   LG C+     + +PP     V A N PS
Sbjct: 552 AYLSLGGLGERVLGFCQLYLNEKDYPPGYAFDVEAMNFPS 591


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,437,611
Number of Sequences: 237096
Number of extensions: 1546056
Number of successful extensions: 6253
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6250
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)