Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331F04f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001284-1|AAN71040.1| 588|Drosophila melanogaster AT08275p pro... 33 0.31
AE013599-2481|AAF57854.3| 584|Drosophila melanogaster CG30103-P... 33 0.31
AY070513-1|AAL47984.1| 551|Drosophila melanogaster GH19382p pro... 30 2.2
AY061187-1|AAL28735.1| 423|Drosophila melanogaster LD15072p pro... 30 2.2
AE013599-2304|AAO41370.1| 577|Drosophila melanogaster CG4945-PC... 30 2.2
AE013599-2303|AAO41369.1| 577|Drosophila melanogaster CG4945-PB... 30 2.2
AE013599-2302|AAF57985.2| 551|Drosophila melanogaster CG4945-PA... 30 2.2
AE013599-1720|AAF58372.1| 423|Drosophila melanogaster CG5970-PA... 30 2.2
AL033125-5|CAA21828.1| 959|Drosophila melanogaster EG:EG0007.12... 28 8.8
AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB ... 28 8.8
>BT001284-1|AAN71040.1| 588|Drosophila melanogaster AT08275p
protein.
Length = 588
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -3
Query: 441 RKSKVSIISPFLAPDTLELSFHRLDDATDSGRPPRK*L*FGSISSNSGSVPLSRMFSRMS 262
R V+ + FLAPD + L H LDD TD+ + F +SSN + ++ +
Sbjct: 104 RGKMVARMLNFLAPDAMALGVHELDDGTDALAEFLNTITFPMVSSNINLINEPKLAENAN 163
Query: 261 SI-SVLFGAGSAALG 220
+ S++ G+ +G
Sbjct: 164 LVTSLVITKGNRKIG 178
>AE013599-2481|AAF57854.3| 584|Drosophila melanogaster CG30103-PA
protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -3
Query: 441 RKSKVSIISPFLAPDTLELSFHRLDDATDSGRPPRK*L*FGSISSNSGSVPLSRMFSRMS 262
R V+ + FLAPD + L H LDD TD+ + F +SSN + ++ +
Sbjct: 100 RGKMVARMLNFLAPDAMALGVHELDDGTDALAEFLNTITFPMVSSNINLINEPKLAENAN 159
Query: 261 SI-SVLFGAGSAALG 220
+ S++ G+ +G
Sbjct: 160 LVTSLVITKGNRKIG 174
>AY070513-1|AAL47984.1| 551|Drosophila melanogaster GH19382p
protein.
Length = 551
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 362 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 228
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AY061187-1|AAL28735.1| 423|Drosophila melanogaster LD15072p
protein.
Length = 423
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 YNHQQPRGIILSYNAIVSKRRK*SSQ-LTSSAGTKSRG 234
+ H+ P G + YNA+VSK + + Q L S+ TKS G
Sbjct: 183 FGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG 220
>AE013599-2304|AAO41370.1| 577|Drosophila melanogaster CG4945-PC,
isoform C protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 362 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 228
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AE013599-2303|AAO41369.1| 577|Drosophila melanogaster CG4945-PB,
isoform B protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 362 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 228
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AE013599-2302|AAF57985.2| 551|Drosophila melanogaster CG4945-PA,
isoform A protein.
Length = 551
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 362 PRTLDAPPESSYDLDPYHRIAGQCH*V--ACSVECLPFRCYLERDPR 228
P L+ PE SY DP H + Q V C CLP++ DPR
Sbjct: 189 PEVLEIKPEGSYKADPSHDV-WQFGIVIFVCLTGCLPWQKAASDDPR 234
>AE013599-1720|AAF58372.1| 423|Drosophila melanogaster CG5970-PA
protein.
Length = 423
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 124 YNHQQPRGIILSYNAIVSKRRK*SSQ-LTSSAGTKSRG 234
+ H+ P G + YNA+VSK + + Q L S+ TKS G
Sbjct: 183 FGHKSPSGNSVLYNAVVSKMAEVTLQSLNSNKRTKSSG 220
>AL033125-5|CAA21828.1| 959|Drosophila melanogaster EG:EG0007.12
protein.
Length = 959
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 LSYNAIVSKRRK*SSQLTSSAGTKSRG--SRSK*HRNGRHSTEH 279
+SY AI S S LTSSA T S G S S H + +ST H
Sbjct: 255 ISYRAIKSCLTINPSALTSSAATGSSGGSSSSAGHNSSYNSTNH 298
>AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB
protein.
Length = 1911
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 LSYNAIVSKRRK*SSQLTSSAGTKSRG--SRSK*HRNGRHSTEH 279
+SY AI S S LTSSA T S G S S H + +ST H
Sbjct: 255 ISYRAIKSCLTINPSALTSSAATGSSGGSSSSAGHNSSYNSTNH 298
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,350,012
Number of Sequences: 53049
Number of extensions: 485962
Number of successful extensions: 1218
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -