Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41996-5|AAA83474.1|  296|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81142-9|CAB03501.2|  370|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z81495-10|CAD57692.1|  480|Caenorhabditis elegans Hypothetical p...    27   6.2  
AL032644-10|CAD57710.1|  480|Caenorhabditis elegans Hypothetical...    27   6.2  
Z81557-5|CAB04533.1|  345|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>U41996-5|AAA83474.1|  296|Caenorhabditis elegans Hypothetical
           protein F38E1.6 protein.
          Length = 296

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 453 KLLMRKSKVSIISPFLAPDTLELSFHRLDDATDSGRPPRK 334
           KL MR+    + + FL   T+ + FHR+++ TD+    R+
Sbjct: 152 KLYMRRFITVLFTIFLINHTVRIFFHRIEEVTDNDMKVRE 191


>Z81142-9|CAB03501.2|  370|Caenorhabditis elegans Hypothetical
           protein ZK1037.1 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +2

Query: 350 PESVASSNLWNDNSSVSGARNGEMMDTF 433
           P+ + ++NL+N+ S++ G    EM+D F
Sbjct: 41  PQCIYTANLYNNRSAIPGLFTSEMVDIF 68


>Z81495-10|CAD57692.1|  480|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1b protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
 Frame = +2

Query: 173 FQRGGNDLLNLLARQEPRAADPAPNSTEMEDILLNMRLNGTDPLFDDMDPNHN-YFLGGR 349
           F +    L+  + ++E R+        E+ D +L   L   D L + +   HN  F  G 
Sbjct: 77  FVKSTLSLVTTMRKEEKRSVKEL--FCEVTDTILGTSLR--DELLEALPSTHNDTFENGT 132

Query: 350 PESVASSNLWNDNSSVSGARNGEMMDTFDFLIKSLSSANNYV 475
           P  V S  L  ++ +  GAR+     T D L  S  S    V
Sbjct: 133 PIYVQSPGLMGNSLAAIGARHQMWESTSDRLSSSSDSCGGPV 174


>AL032644-10|CAD57710.1|  480|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1b protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
 Frame = +2

Query: 173 FQRGGNDLLNLLARQEPRAADPAPNSTEMEDILLNMRLNGTDPLFDDMDPNHN-YFLGGR 349
           F +    L+  + ++E R+        E+ D +L   L   D L + +   HN  F  G 
Sbjct: 77  FVKSTLSLVTTMRKEEKRSVKEL--FCEVTDTILGTSLR--DELLEALPSTHNDTFENGT 132

Query: 350 PESVASSNLWNDNSSVSGARNGEMMDTFDFLIKSLSSANNYV 475
           P  V S  L  ++ +  GAR+     T D L  S  S    V
Sbjct: 133 PIYVQSPGLMGNSLAAIGARHQMWESTSDRLSSSSDSCGGPV 174


>Z81557-5|CAB04533.1|  345|Caenorhabditis elegans Hypothetical
           protein F59A1.10 protein.
          Length = 345

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 311 DMDPNHNYFLGGRPESVASSNLWN 382
           ++DPN NY  G  P  +     W+
Sbjct: 107 ELDPNQNYLFGYHPHGILGVGAWS 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,875,836
Number of Sequences: 27780
Number of extensions: 241202
Number of successful extensions: 550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)