Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F03f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021221-1|AAX33369.1|  267|Drosophila melanogaster RH53050p pro...   146   2e-35
AE014297-2932|AAF55851.1|  460|Drosophila melanogaster CG5786-PA...   146   2e-35
AF102805-1|AAD16459.1|  460|Drosophila melanogaster Peter Pan pr...   142   3e-34
AF454349-1|AAL91723.1|  689|Drosophila melanogaster unconvention...    34   0.10 
AF454348-1|AAL91722.1| 1313|Drosophila melanogaster unconvention...    34   0.10 
AE014134-1525|AAS64742.1|  690|Drosophila melanogaster CG10595-P...    34   0.10 
AE014134-1524|AAS64741.1| 1317|Drosophila melanogaster CG10595-P...    34   0.10 
AY051683-1|AAK93107.1|  394|Drosophila melanogaster LD23405p pro...    30   2.2  
AE014134-2155|AAF53162.1|  394|Drosophila melanogaster CG6712-PA...    30   2.2  

>BT021221-1|AAX33369.1|  267|Drosophila melanogaster RH53050p
           protein.
          Length = 267

 Score =  146 bits (353), Expect = 2e-35
 Identities = 68/125 (54%), Positives = 91/125 (72%)
 Frame = +3

Query: 147 SASKEALEPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTASQLKERKKNTIKDF 326
           +A+ +A EP  +V+APHSFVIHRG     + DLT DFR+IMEPFTAS L+E++ N IKDF
Sbjct: 13  TAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIKDF 72

Query: 327 VSISGYLHVSHMVLFTETELGSYMRLARLPRGPTLTFKIHNYSLARDVISSLKKQYVMMR 506
           VS+S + HVSHM +F +       ++ RLPRGP+LTFK+H ++LARDVIS  KKQ +   
Sbjct: 73  VSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDND 132

Query: 507 AFQNA 521
            F++A
Sbjct: 133 HFKHA 137


>AE014297-2932|AAF55851.1|  460|Drosophila melanogaster CG5786-PA
           protein.
          Length = 460

 Score =  146 bits (353), Expect = 2e-35
 Identities = 68/125 (54%), Positives = 91/125 (72%)
 Frame = +3

Query: 147 SASKEALEPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTASQLKERKKNTIKDF 326
           +A+ +A EP  +V+APHSFVIHRG     + DLT DFR+IMEPFTAS L+E++ N IKDF
Sbjct: 13  TAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIKDF 72

Query: 327 VSISGYLHVSHMVLFTETELGSYMRLARLPRGPTLTFKIHNYSLARDVISSLKKQYVMMR 506
           VS+S + HVSHM +F +       ++ RLPRGP+LTFK+H ++LARDVIS  KKQ +   
Sbjct: 73  VSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDND 132

Query: 507 AFQNA 521
            F++A
Sbjct: 133 HFKHA 137


>AF102805-1|AAD16459.1|  460|Drosophila melanogaster Peter Pan
           protein.
          Length = 460

 Score =  142 bits (344), Expect = 3e-34
 Identities = 66/125 (52%), Positives = 90/125 (72%)
 Frame = +3

Query: 147 SASKEALEPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTASQLKERKKNTIKDF 326
           +A+ +A EP  +V+APHSFVIHRG     + DLT DFR+IMEPFTAS L+E++ N I+DF
Sbjct: 13  TAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDF 72

Query: 327 VSISGYLHVSHMVLFTETELGSYMRLARLPRGPTLTFKIHNYSLARDVISSLKKQYVMMR 506
           V +S + HVSHM +F +       ++ RLPRGP+LTFK+H ++LARDVIS  KKQ +   
Sbjct: 73  VCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDND 132

Query: 507 AFQNA 521
            F++A
Sbjct: 133 HFKHA 137


>AF454349-1|AAL91723.1|  689|Drosophila melanogaster unconventional
           myosin 29D shortisoform protein.
          Length = 689

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 EPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTAS------QLKERKKNTIKDFV 329
           +P N++  P  F  H+G+CS   + L    + +  P  AS       L++R K+   + V
Sbjct: 49  DPHNILHKPERFRQHQGKCS---IKLDTSVQNLTRPIHASSSNEAVHLQQRLKSLSTELV 105

Query: 330 SISGYLHVSH 359
           ++   LHV H
Sbjct: 106 TLRNRLHVGH 115


>AF454348-1|AAL91722.1| 1313|Drosophila melanogaster unconventional
           myosin 29D protein.
          Length = 1313

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 EPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTAS------QLKERKKNTIKDFV 329
           +P N++  P  F  H+G+CS   + L    + +  P  AS       L++R K+   + V
Sbjct: 49  DPHNILHKPERFRQHQGKCS---IKLDTSVQNLTRPIHASSSNEAVHLQQRLKSLSTELV 105

Query: 330 SISGYLHVSH 359
           ++   LHV H
Sbjct: 106 TLRNRLHVGH 115


>AE014134-1525|AAS64742.1|  690|Drosophila melanogaster CG10595-PC,
           isoform C protein.
          Length = 690

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 EPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTAS------QLKERKKNTIKDFV 329
           +P N++  P  F  H+G+CS   + L    + +  P  AS       L++R K+   + V
Sbjct: 49  DPHNILHKPERFRQHQGKCS---IKLDTSVQNLTRPIHASSSNEAVHLQQRLKSLSTELV 105

Query: 330 SISGYLHVSH 359
           ++   LHV H
Sbjct: 106 TLRNRLHVGH 115


>AE014134-1524|AAS64741.1| 1317|Drosophila melanogaster CG10595-PB,
           isoform B protein.
          Length = 1317

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +3

Query: 168 EPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTAS------QLKERKKNTIKDFV 329
           +P N++  P  F  H+G+CS   + L    + +  P  AS       L++R K+   + V
Sbjct: 49  DPHNILHKPERFRQHQGKCS---IKLDTSVQNLTRPIHASSSNEAVHLQQRLKSLSTELV 105

Query: 330 SISGYLHVSH 359
           ++   LHV H
Sbjct: 106 TLRNRLHVGH 115


>AY051683-1|AAK93107.1|  394|Drosophila melanogaster LD23405p
           protein.
          Length = 394

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +3

Query: 237 VDLTRDFR-KIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELG-SYMRLAR 410
           V  TR F  ++   F  + +K R K+++K     +     + +V+  E     + + +  
Sbjct: 196 VTKTRKFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIH 255

Query: 411 LPRGPTLTFKIHNYSLARDV 470
           LP GPT  FK+ N  L  D+
Sbjct: 256 LPNGPTAHFKLSNVKLTSDI 275


>AE014134-2155|AAF53162.1|  394|Drosophila melanogaster CG6712-PA
           protein.
          Length = 394

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = +3

Query: 237 VDLTRDFR-KIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELG-SYMRLAR 410
           V  TR F  ++   F  + +K R K+++K     +     + +V+  E     + + +  
Sbjct: 196 VTKTRKFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIH 255

Query: 411 LPRGPTLTFKIHNYSLARDV 470
           LP GPT  FK+ N  L  D+
Sbjct: 256 LPNGPTAHFKLSNVKLTSDI 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,371,089
Number of Sequences: 53049
Number of extensions: 400403
Number of successful extensions: 731
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)