Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043700-5|AAB97575.2|  573|Caenorhabditis elegans Lipid deplete...    93   1e-19
Z73422-7|CAA97769.2|  603|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68760-15|CAL44969.1|  462|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68760-12|CAD27623.1|  436|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68760-11|CAA92997.2|  438|Caenorhabditis elegans Hypothetical p...    27   6.2  
X68070-1|CAA48207.1|  438|Caenorhabditis elegans Lin-3 protein.        27   6.2  
AL032641-9|CAL44964.1|  462|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL032641-6|CAD27613.1|  436|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL032641-5|CAA21649.2|  438|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AF043700-5|AAB97575.2|  573|Caenorhabditis elegans Lipid depleted
           protein 6 protein.
          Length = 573

 Score = 93.1 bits (221), Expect = 1e-19
 Identities = 44/114 (38%), Positives = 68/114 (59%)
 Frame = +3

Query: 180 LVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSH 359
           L + PH  VIHRG   K +  L  D R ++EP TA  LK  K+N IKDF+     L V++
Sbjct: 52  LARQPHCLVIHRGDVGKYVKGLESDLRNLVEPNTAKNLKILKRNNIKDFIVNGAVLGVTN 111

Query: 360 MVLFTETELGSYMRLARLPRGPTLTFKIHNYSLARDVISSLKKQYVMMRAFQNA 521
           M++ T ++    +R+ R  +GPTL+FK+  YSLAR V++  K+     + F+++
Sbjct: 112 MMVLTSSDASLQLRMMRFSQGPTLSFKVKQYSLARHVVNCQKRPVATDKLFKSS 165


>Z73422-7|CAA97769.2|  603|Caenorhabditis elegans Hypothetical
           protein B0564.7 protein.
          Length = 603

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 262 FLKSLVKSTRSLLHCPL*ITNECGAF 185
           FLKSL K      HC L    +CGAF
Sbjct: 483 FLKSLFKLAPQDTHCQLPNVEDCGAF 508


>Z68760-15|CAL44969.1|  462|Caenorhabditis elegans Hypothetical
           protein F36H1.4d protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 127 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 184

Query: 420 G 422
           G
Sbjct: 185 G 185


>Z68760-13|CAD30434.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 129 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 186

Query: 420 G 422
           G
Sbjct: 187 G 187


>Z68760-12|CAD27623.1|  436|Caenorhabditis elegans Hypothetical
           protein F36H1.4b protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 127 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 184

Query: 420 G 422
           G
Sbjct: 185 G 185


>Z68760-11|CAA92997.2|  438|Caenorhabditis elegans Hypothetical
           protein F36H1.4a protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 129 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 186

Query: 420 G 422
           G
Sbjct: 187 G 187


>X68070-1|CAA48207.1|  438|Caenorhabditis elegans Lin-3 protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 129 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 186

Query: 420 G 422
           G
Sbjct: 187 G 187


>AL032641-9|CAL44964.1|  462|Caenorhabditis elegans Hypothetical
           protein F36H1.4d protein.
          Length = 462

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 127 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 184

Query: 420 G 422
           G
Sbjct: 185 G 185


>AL032641-7|CAD30455.1|  423|Caenorhabditis elegans Hypothetical
           protein F36H1.4c protein.
          Length = 423

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 129 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 186

Query: 420 G 422
           G
Sbjct: 187 G 187


>AL032641-6|CAD27613.1|  436|Caenorhabditis elegans Hypothetical
           protein F36H1.4b protein.
          Length = 436

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 127 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 184

Query: 420 G 422
           G
Sbjct: 185 G 185


>AL032641-5|CAA21649.2|  438|Caenorhabditis elegans Hypothetical
           protein F36H1.4a protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 240 DLTRDFRKIMEPFTASQLKERKKNTIKDFVSISGYLHVSHMVLFTETELGSYMRLARLPR 419
           D T+D    ++P    ++++ K+   KD+   +   HV   V+F E  + + +     P+
Sbjct: 129 DATQDATSTLKPAVRKEIEKLKEAKCKDYCHHNATCHVE--VIFREDRVSAVVPSCHCPQ 186

Query: 420 G 422
           G
Sbjct: 187 G 187


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 ASKEALEPENLVKAPHSFVIHRGQCSKDLVDLTRDFRKIMEPFT 281
           A +   E    +    SF  H G+  K L+D  R+  K  EPFT
Sbjct: 330 AEEPKKETRFFISKGSSFRYH-GRTQKQLIDYVREHHKRREPFT 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,529,178
Number of Sequences: 27780
Number of extensions: 221374
Number of successful extensions: 518
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)