Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331F02f
(400 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein. 32 0.61
AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein. 32 0.61
AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein. 32 0.61
AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein. 32 0.61
AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein. 32 0.61
AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein. 32 0.61
AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein. 32 0.61
AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin prec... 32 0.61
AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin prec... 32 0.61
AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein. 32 0.61
X76534-1|CAA54044.1| 560|Homo sapiens NMB protein. 32 0.81
BT007074-1|AAP35737.1| 206|Homo sapiens glycoprotein (transmemb... 32 0.81
BC032783-1|AAH32783.1| 572|Homo sapiens glycoprotein (transmemb... 32 0.81
BC011595-1|AAH11595.1| 206|Homo sapiens GPNMB protein protein. 32 0.81
AY359124-1|AAQ89481.1| 572|Homo sapiens NMB protein. 32 0.81
AJ505015-1|CAD43718.1| 206|Homo sapiens glycoprotein nmb-like p... 32 0.81
AF322909-1|AAG42839.1| 560|Homo sapiens transmembrane glycoprot... 32 0.81
AC005082-2|AAP22337.1| 206|Homo sapiens unknown protein. 32 0.81
AC005082-1|AAP22336.1| 560|Homo sapiens unknown protein. 32 0.81
BC016745-1|AAH16745.1| 299|Homo sapiens capping protein (actin ... 30 3.3
AK058174-1|BAB71703.1| 299|Homo sapiens protein ( Homo sapiens ... 30 3.3
AB053259-1|BAB61901.1| 299|Homo sapiens male germ cell-specific... 30 3.3
BC084555-1|AAH84555.1| 454|Homo sapiens FLJ37464 protein protein. 29 7.5
BC064573-1|AAH64573.1| 442|Homo sapiens FLJ37464 protein protein. 29 7.5
AY358504-1|AAQ88868.1| 545|Homo sapiens carboxylesterase Hlo pr... 29 7.5
AK094783-1|BAC04422.1| 367|Homo sapiens protein ( Homo sapiens ... 29 7.5
AF242519-1|AAF99600.1| 461|Homo sapiens zinc finger protein SBZ... 28 9.9
>BC101705-1|AAI01706.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL353193-3|CAH70472.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL353193-2|CAH70471.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL132773-2|CAI22616.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL132773-1|CAI22614.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL109805-3|CAI21878.1| 1429|Homo sapiens attractin protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AL109805-2|CAI21876.1| 1272|Homo sapiens attractin protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF218915-1|AAF72881.1| 1429|Homo sapiens membrane attractin
precursor protein.
Length = 1429
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF218910-1|AAF72882.1| 1272|Homo sapiens secreted attractin
precursor protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>AF106861-1|AAD03057.1| 1272|Homo sapiens attractin-2 protein.
Length = 1272
Score = 32.3 bits (70), Expect = 0.61
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 116 NCWACSSNVNPL--CND---PFNIRIDTGNSYLFRLENCDKN 226
+C++C++N N CND P N G +FR ENC K+
Sbjct: 709 DCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKD 750
>X76534-1|CAA54044.1| 560|Homo sapiens NMB protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>BT007074-1|AAP35737.1| 206|Homo sapiens glycoprotein
(transmembrane) nmb protein.
Length = 206
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>BC032783-1|AAH32783.1| 572|Homo sapiens glycoprotein
(transmembrane) nmb protein.
Length = 572
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>BC011595-1|AAH11595.1| 206|Homo sapiens GPNMB protein protein.
Length = 206
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>AY359124-1|AAQ89481.1| 572|Homo sapiens NMB protein.
Length = 572
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>AJ505015-1|CAD43718.1| 206|Homo sapiens glycoprotein nmb-like
protein protein.
Length = 206
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>AF322909-1|AAG42839.1| 560|Homo sapiens transmembrane glycoprotein
HGFIN protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>AC005082-2|AAP22337.1| 206|Homo sapiens unknown protein.
Length = 206
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>AC005082-1|AAP22336.1| 560|Homo sapiens unknown protein.
Length = 560
Score = 31.9 bits (69), Expect = 0.81
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 RLLRFWK*GNRLWKSSWR-FQVQPRLTTNSPSM 289
+L WK G+ WK+SW+ +VQ LT++SP++
Sbjct: 57 KLYPVWKRGDMRWKNSWKGGRVQAVLTSDSPAL 89
>BC016745-1|AAH16745.1| 299|Homo sapiens capping protein (actin
filament) muscle Z-line, alpha 3 protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 357 NRLWKSSWRFQVQPRLT 307
N LWKS W FQV P LT
Sbjct: 167 NGLWKSKWIFQVNPFLT 183
>AK058174-1|BAB71703.1| 299|Homo sapiens protein ( Homo sapiens
cDNA FLJ25445 fis, clone TST08542, highly similar to Mus
musculus mRNA for gsg3. ).
Length = 299
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 357 NRLWKSSWRFQVQPRLT 307
N LWKS W FQV P LT
Sbjct: 167 NGLWKSKWIFQVNPFLT 183
>AB053259-1|BAB61901.1| 299|Homo sapiens male germ cell-specific
actin capping protein alpha3 protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 357 NRLWKSSWRFQVQPRLT 307
N LWKS W FQV P LT
Sbjct: 167 NGLWKSKWIFQVNPFLT 183
>BC084555-1|AAH84555.1| 454|Homo sapiens FLJ37464 protein protein.
Length = 454
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 323 CNHDSQLIHHQCISFLSCIQTSKLSNKER*LQ 228
CNH+S I C+ LS + ++SNK R LQ
Sbjct: 236 CNHNSTQILVNCLRALSGTKVMRVSNKMRFLQ 267
>BC064573-1|AAH64573.1| 442|Homo sapiens FLJ37464 protein protein.
Length = 442
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 323 CNHDSQLIHHQCISFLSCIQTSKLSNKER*LQ 228
CNH+S I C+ LS + ++SNK R LQ
Sbjct: 154 CNHNSTQILVNCLRALSGTKVMRVSNKMRFLQ 185
>AY358504-1|AAQ88868.1| 545|Homo sapiens carboxylesterase Hlo
protein.
Length = 545
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 323 CNHDSQLIHHQCISFLSCIQTSKLSNKER*LQ 228
CNH+S I C+ LS + ++SNK R LQ
Sbjct: 377 CNHNSTQILVNCLRALSGTKVMRVSNKMRFLQ 408
>AK094783-1|BAC04422.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ37464 fis, clone BRAWH2011795, weakly similar to
LIVER CARBOXYLESTERASE PRECURSOR (EC 3.1.1.1). ).
Length = 367
Score = 28.7 bits (61), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 323 CNHDSQLIHHQCISFLSCIQTSKLSNKER*LQ 228
CNH+S I C+ LS + ++SNK R LQ
Sbjct: 79 CNHNSTQILVNCLRALSGTKVMRVSNKMRFLQ 110
>AF242519-1|AAF99600.1| 461|Homo sapiens zinc finger protein SBZF3
protein.
Length = 461
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 101 DSEPVNCWACSSNVNPLCND-PFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKK 277
+ + C C N LC+ + +I TG ++ E C K+ FPYLT K + +
Sbjct: 264 EKKTYRCEECGKAFN-LCSVLTKHKKIHTGEKP-YKCEECGKSF-KLFPYLTQHKRIHSR 320
Query: 278 EKKY 289
EK Y
Sbjct: 321 EKPY 324
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,841,764
Number of Sequences: 237096
Number of extensions: 1119482
Number of successful extensions: 2372
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2372
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -