Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331F02f
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075543-1|AAL68350.1| 159|Drosophila melanogaster RH34376p pro... 48 6e-06
AE014134-3303|AAF53934.3| 159|Drosophila melanogaster CG31676-P... 48 6e-06
AE014134-2176|AAF53178.1| 151|Drosophila melanogaster CG17218-P... 33 0.11
BT010209-1|AAQ23527.1| 155|Drosophila melanogaster RH58203p pro... 32 0.24
AY069299-1|AAL39444.1| 155|Drosophila melanogaster HL02087p pro... 32 0.24
AE013599-1772|AAO41394.1| 155|Drosophila melanogaster CG6329-PD... 32 0.24
AE013599-1771|AAG22271.1| 155|Drosophila melanogaster CG6329-PC... 32 0.24
AE013599-1770|AAF58332.1| 155|Drosophila melanogaster CG6329-PB... 32 0.24
AE013599-1769|AAM71008.1| 155|Drosophila melanogaster CG6329-PA... 32 0.24
AY071603-1|AAL49225.1| 80|Drosophila melanogaster RE65321p pro... 31 0.56
BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p pro... 30 1.3
AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA... 30 1.3
AY069612-1|AAL39757.2| 354|Drosophila melanogaster LD37349p pro... 28 5.3
AE014297-2750|AAF55734.3| 345|Drosophila melanogaster CG4424-PA... 28 5.3
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 27 7.0
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 27 7.0
AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-P... 27 7.0
>AY075543-1|AAL68350.1| 159|Drosophila melanogaster RH34376p
protein.
Length = 159
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 104 SEPVNCWACSSNVN--PLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKK 277
S + CW CS++V+ CNDPF + + NC + GA ++ VCKK
Sbjct: 24 SAVLRCWRCSTDVSNGEFCNDPFMPETISEQQRYWSYVNCTYSVGAKS---VNARPVCKK 80
Query: 278 EKKYIDGELVVSRGCTWKRQDD 343
+ + G+ V+SR C ++ DD
Sbjct: 81 LVQEVYGKRVISRSCFYEDMDD 102
>AE014134-3303|AAF53934.3| 159|Drosophila melanogaster CG31676-PA
protein.
Length = 159
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 104 SEPVNCWACSSNVN--PLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKK 277
S + CW CS++V+ CNDPF + + NC + GA ++ VCKK
Sbjct: 24 SAVLRCWRCSTDVSNGEFCNDPFMPETISEQQRYWSYVNCTYSVGAKS---VNARPVCKK 80
Query: 278 EKKYIDGELVVSRGCTWKRQDD 343
+ + G+ V+SR C ++ DD
Sbjct: 81 LVQEVYGKRVISRSCFYEDMDD 102
>AE014134-2176|AAF53178.1| 151|Drosophila melanogaster CG17218-PA,
isoform A protein.
Length = 151
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 107 EPVNCWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASK-SVCKKEK 283
+ + CW C S+ +P C DPF+ NS L + +C + +L + ++C+K +
Sbjct: 22 QAIKCWDCRSDNDPKCGDPFD------NSTL-AITDCQQ--APELEHLKGVRPTMCRKIR 72
Query: 284 KYIDGELVVSRGCTW 328
+ + GE R C +
Sbjct: 73 QKVHGEWRYFRSCAY 87
>BT010209-1|AAQ23527.1| 155|Drosophila melanogaster RH58203p
protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 119 CWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKKEKKYIDG 298
C+ C+S +P C DPF Y NC K ++C+K + I G
Sbjct: 26 CYDCNSEFDPRCGDPF-------EPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTVQKIYG 78
Query: 299 ELVVSRGC 322
+ + RGC
Sbjct: 79 KTRIVRGC 86
>AY069299-1|AAL39444.1| 155|Drosophila melanogaster HL02087p
protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 119 CWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKKEKKYIDG 298
C+ C+S +P C DPF Y NC K ++C+K + I G
Sbjct: 26 CYDCNSEFDPRCGDPF-------EPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTVQKIYG 78
Query: 299 ELVVSRGC 322
+ + RGC
Sbjct: 79 KTRIVRGC 86
>AE013599-1772|AAO41394.1| 155|Drosophila melanogaster CG6329-PD,
isoform D protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 119 CWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKKEKKYIDG 298
C+ C+S +P C DPF Y NC K ++C+K + I G
Sbjct: 26 CYDCNSEFDPRCGDPF-------EPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTVQKIYG 78
Query: 299 ELVVSRGC 322
+ + RGC
Sbjct: 79 KTRIVRGC 86
>AE013599-1771|AAG22271.1| 155|Drosophila melanogaster CG6329-PC,
isoform C protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 119 CWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKKEKKYIDG 298
C+ C+S +P C DPF Y NC K ++C+K + I G
Sbjct: 26 CYDCNSEFDPRCGDPF-------EPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTVQKIYG 78
Query: 299 ELVVSRGC 322
+ + RGC
Sbjct: 79 KTRIVRGC 86
>AE013599-1770|AAF58332.1| 155|Drosophila melanogaster CG6329-PB,
isoform B protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 119 CWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKKEKKYIDG 298
C+ C+S +P C DPF Y NC K ++C+K + I G
Sbjct: 26 CYDCNSEFDPRCGDPF-------EPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTVQKIYG 78
Query: 299 ELVVSRGC 322
+ + RGC
Sbjct: 79 KTRIVRGC 86
>AE013599-1769|AAM71008.1| 155|Drosophila melanogaster CG6329-PA,
isoform A protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +2
Query: 119 CWACSSNVNPLCNDPFNIRIDTGNSYLFRLENCDKNAGATFPYLTASKSVCKKEKKYIDG 298
C+ C+S +P C DPF Y NC K ++C+K + I G
Sbjct: 26 CYDCNSEFDPRCGDPF-------EPYSIGEVNCSKQEPLEHLKDKYKPTLCRKTVQKIYG 78
Query: 299 ELVVSRGC 322
+ + RGC
Sbjct: 79 KTRIVRGC 86
>AY071603-1|AAL49225.1| 80|Drosophila melanogaster RE65321p
protein.
Length = 80
Score = 31.1 bits (67), Expect = 0.56
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 107 EPVNCWACSSNVNPLCNDPFN 169
+ + CW C S+ +P C DPF+
Sbjct: 22 QAIKCWDCRSDNDPKCGDPFD 42
>BT004470-1|AAO42634.1| 1248|Drosophila melanogaster SD07139p
protein.
Length = 1248
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 131 NTPNNSLVHCPSRIAQEAKRAQETIVLP 48
N NNS H P RI QE + E I++P
Sbjct: 419 NNNNNSFNHTPKRIKQEIEIKSEEIIVP 446
>AE014297-2960|AAF55869.3| 1251|Drosophila melanogaster CG5874-PA
protein.
Length = 1251
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 131 NTPNNSLVHCPSRIAQEAKRAQETIVLP 48
N NNS H P RI QE + E I++P
Sbjct: 422 NNNNNSFNHTPKRIKQEIEIKSEEIIVP 449
>AY069612-1|AAL39757.2| 354|Drosophila melanogaster LD37349p
protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 222 LSQFSRRNK*EFPVSIRILKGSLHSGFTLDEHAQQFTGSLSFT 94
L RR+ E P I S H + L H +Q TG+ +T
Sbjct: 211 LDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYT 253
>AE014297-2750|AAF55734.3| 345|Drosophila melanogaster CG4424-PA
protein.
Length = 345
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 222 LSQFSRRNK*EFPVSIRILKGSLHSGFTLDEHAQQFTGSLSFT 94
L RR+ E P I S H + L H +Q TG+ +T
Sbjct: 202 LDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYT 244
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 122 NNSLVHCPSRIAQEAKRAQETIVLPL*CTINSLG 21
N+ L HC + + K + E +V+P+ C+ + +G
Sbjct: 278 NDILHHCMRKNINDLKNSLENVVIPMFCSADLIG 311
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 122 NNSLVHCPSRIAQEAKRAQETIVLPL*CTINSLG 21
N+ L HC + + K + E +V+P+ C+ + +G
Sbjct: 278 NDILHHCMRKNINDLKNSLENVVIPMFCSADLIG 311
>AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-PA
protein.
Length = 527
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 251 TASKSVCKKEKKYID---GELVVSRGCTWKRQDDFQSRLPYFQKRSKRSXSL 397
T + VC ++ +D G +V G T K + F+S L +R K S L
Sbjct: 58 TRGRGVCCEKLSIVDQIEGRAIVQNGATTKARGIFESTLNSVAERKKHSEKL 109
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,251,976
Number of Sequences: 53049
Number of extensions: 368012
Number of successful extensions: 860
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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