Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331F02f
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.24 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   3.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   3.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.9  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   9.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   9.1  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   9.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 230 QHSCRSFRGGTNKNSRCRYGY*KDRCTADS 141
           Q  C  + G    N+ C Y   KD C  DS
Sbjct: 320 QVECYKYYGNIMVNAMCAYAKGKDACQMDS 349


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 330 NARMTSKAGCP 362
           ++R+T KAGCP
Sbjct: 121 SSRLTIKAGCP 131


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 233 ATFPYLTASKSVCKKEKK 286
           A  P + ++ S CKK+KK
Sbjct: 568 ARTPSVMSASSTCKKDKK 585


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 87  ARSKTGTRNDSFAIMMHNKL 28
           A  + G RN      MHNKL
Sbjct: 347 AADRPGLRNTELVERMHNKL 366


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 203 GTNKNSRCRYGY*KDRCTAD 144
           G  K   C Y Y  ++C A+
Sbjct: 117 GIAKGDNCEYAYRFNKCYAE 136


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/40 (25%), Positives = 15/40 (37%)
 Frame = +2

Query: 206 LENCDKNAGATFPYLTASKSVCKKEKKYIDGELVVSRGCT 325
           LE C       +P +       K + K   G+  +  GCT
Sbjct: 400 LERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCT 439


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +2

Query: 254 ASKSVCKKEKKYIDGELVVSRGCTWKRQDDFQSRL 358
           A++ +      Y+  E +      W+ +DD+ S L
Sbjct: 332 AAREITSSSCSYMAHEKLSYAFSVWRMEDDWNSNL 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,573
Number of Sequences: 438
Number of extensions: 2111
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)