Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331E05f
         (323 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778...    29   0.63 
11_08_0075 + 28173220-28173433,28175348-28177083                       28   1.5  
08_02_0311 - 15635165-15635590,15635777-15638698                       28   1.5  
05_05_0109 - 22454539-22456268,22457069-22457279                       28   1.5  
03_02_0540 + 9340379-9340592,9341250-9342988                           28   1.5  
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229     28   1.5  
03_02_0546 - 9381989-9383733,9385838-9386054                           28   1.9  
12_01_0081 - 657672-657713,657993-658151,658359-658919                 27   4.5  
03_06_0484 + 34233042-34233258,34235317-34237049                       27   4.5  
09_04_0569 + 18600750-18602117                                         26   7.8  

>12_02_0825 +
           23476943-23476952,23477263-23477328,23477737-23477885,
           23478148-23478212,23479247-23479710,23479724-23480208
          Length = 412

 Score = 29.5 bits (63), Expect = 0.63
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGPVP 301
           DFD +MV   V  F +K KK+  G P P
Sbjct: 261 DFDNRMVKHFVQEFKRKSKKDITGNPRP 288


>11_08_0075 + 28173220-28173433,28175348-28177083
          Length = 649

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGP 295
           DFD +MV   V  F +K KK+  G P
Sbjct: 238 DFDNRMVNHFVQEFKRKNKKDITGNP 263


>08_02_0311 - 15635165-15635590,15635777-15638698
          Length = 1115

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
 Frame = -3

Query: 255  LYTKKVTILRSKSYFTIN-YIHTHIF----CYIKFISLFTNKFFVVKL 127
            L ++K+ +L+  SY  +  Y  T IF    C+I  +SLF+  F V KL
Sbjct: 905  LASRKLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKL 952


>05_05_0109 - 22454539-22456268,22457069-22457279
          Length = 646

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGP 295
           DFD +MV   V  F +K KK+  G P
Sbjct: 237 DFDNRMVNHFVQEFKRKNKKDISGNP 262


>03_02_0540 + 9340379-9340592,9341250-9342988
          Length = 650

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGP 295
           DFD +MV   V  F +K KK+  G P
Sbjct: 238 DFDNRMVNHFVQEFKRKNKKDITGNP 263


>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
          Length = 841

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGP 295
           DFD +MV   V  F +K KK+  G P
Sbjct: 430 DFDNRMVNHFVLEFKRKNKKDISGNP 455


>03_02_0546 - 9381989-9383733,9385838-9386054
          Length = 653

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGP 295
           DFD +MV   V  F +K KK+  G P
Sbjct: 239 DFDNRMVNHFVQEFKRKHKKDITGNP 264


>12_01_0081 - 657672-657713,657993-658151,658359-658919
          Length = 253

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 216 YFTINYIHTHIFCYIKFISLFTNKFFVVKLFSFTSQQVQI 97
           Y +     TH F  +  ISL + +F V K+FS   Q  +I
Sbjct: 174 YVSSKLCGTHAFDTLDLISLGSGRFCVAKMFSSMMQDDEI 213


>03_06_0484 + 34233042-34233258,34235317-34237049
          Length = 649

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 218 DFDLKMVTFLVYNFLKKKKKNSRGGP 295
           DFD ++V   V  F +K KK+  G P
Sbjct: 239 DFDNRLVNHFVQEFKRKHKKDISGNP 264


>09_04_0569 + 18600750-18602117
          Length = 455

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 115 KSASPDIRSVRRARTYQRGADGTALLVA 32
           + A  D+ +VR  R   RGA GT  LVA
Sbjct: 8   RMADIDLDAVRAVRVLGRGAMGTVFLVA 35


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,842,510
Number of Sequences: 37544
Number of extensions: 115157
Number of successful extensions: 249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)