Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS331E05f
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   2.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   2.8  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   4.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   6.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   8.6  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    20   8.6  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 85  RRARTYQRGADGTAL 41
           RR  T +RG+DG+ L
Sbjct: 84  RRTNTLRRGSDGSQL 98


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 85  RRARTYQRGADGTAL 41
           RR  T +RG+DG+ L
Sbjct: 532 RRTNTLRRGSDGSQL 546


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 129 LFSFTSQQVQILEACAERERINAAQTARRYL 37
           LF  T       E   E  +IN ++ A RYL
Sbjct: 533 LFGNTVNLTSRTETTGEPGKINVSEDAYRYL 563


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 129 LFSFTSQQVQILEACAERERINAAQTARRYL 37
           LF  T       E   E  +IN ++ A RYL
Sbjct: 533 LFGNTVNLTSRTETTGEPGKINVSEDAYRYL 563


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +3

Query: 174 CNKKCACE 197
           CNK+C C+
Sbjct: 474 CNKRCNCD 481


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -3

Query: 240 VTILRSKSYFTINYIHTHIFCYIKFISLFTNKFFVVKLFSFTSQQVQILEAC 85
           + I R+K + T+      I   + +ISL TN+    KL  + +       AC
Sbjct: 72  IEIWRNKLFVTVPRWRNGIPATLTYISLDTNRGGSPKLTPYPNWAQNKAGAC 123


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 186 CACECSLS*NKTLTS 230
           C CEC L+  +T T+
Sbjct: 3   CLCECDLATPRTGTN 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,867
Number of Sequences: 438
Number of extensions: 1123
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)