Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS331E01f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 230 5e-61
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 196 1e-50
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 180 6e-46
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 180 7e-46
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 166 7e-42
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 166 7e-42
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 166 7e-42
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 165 1e-41
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 152 2e-37
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 151 3e-37
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 127 4e-30
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 127 4e-30
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 126 1e-29
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 126 1e-29
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 126 1e-29
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 122 2e-28
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 122 2e-28
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 122 2e-28
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 116 8e-27
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 116 8e-27
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 113 1e-25
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 113 1e-25
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 111 4e-25
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 110 5e-25
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 109 9e-25
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 109 9e-25
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 107 5e-24
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 101 4e-22
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 101 4e-22
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 100 1e-21
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 100 1e-21
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 96 2e-20
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 95 4e-20
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 94 6e-20
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 91 4e-19
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 87 9e-18
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 87 9e-18
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 85 3e-17
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 81 4e-16
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 73 9e-14
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 73 9e-14
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 72 3e-13
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 71 5e-13
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 67 6e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 67 6e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 67 6e-12
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 59 2e-09
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 54 6e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 54 6e-08
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 45 3e-05
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 41 6e-04
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 39 0.002
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 39 0.002
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.031
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.094
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.66
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.66
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.0
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 2.0
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 2.0
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 2.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 6.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 6.2
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 27 8.1
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 8.1
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 8.1
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 230 bits (562), Expect = 5e-61
Identities = 106/173 (61%), Positives = 140/173 (80%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EA P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VH
Sbjct: 132 FNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVH 190
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
I Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARDLE
Sbjct: 191 ITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLE 250
Query: 362 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 520
RGV+IV+ATPGRL+DFL+ GTTN+++C+YLVLDEADRMLDMGFEPQI+KII Q
Sbjct: 251 RGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQ 303
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 196 bits (477), Expect = 1e-50
Identities = 92/176 (52%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
+EEA FPD V Q VK +GY EPTPIQ Q PI + ++++GVA+TGSGKT A++LP +V
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 182 INNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
I + P + R + GP A+++APTRELAQQI++ FG ++ V GGA + +Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQG 422
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 517
L GVE+VIATPGRL+D LE L +CTY++LDEADRMLDMGFEP ++K++E
Sbjct: 423 MKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLE 478
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 180 bits (438), Expect = 6e-46
Identities = 81/171 (47%), Positives = 118/171 (69%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F +F + + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVH
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
I +QP ++ G+GP+A+++ PTRELA Q+ Q A F + C +GG K EQ+ +L+
Sbjct: 327 IMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQ 386
Query: 362 -RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
G E+V+ TPGR+ID ++ G TN R T+LV DEADRM DMGFE Q++ I
Sbjct: 387 NEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSI 437
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 180 bits (437), Expect = 7e-46
Identities = 87/161 (54%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Frame = +2
Query: 41 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 220
+K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +QP + GDGP
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGP 378
Query: 221 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 400
IA++LAPTRELA Q + A F ++ C +GG EQ DL+RG EIV+ TPGR+
Sbjct: 379 IAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRM 438
Query: 401 IDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKII 514
ID L + TNL+R TYLVLDEADRM D GFEPQI K++
Sbjct: 439 IDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVV 479
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 166 bits (404), Expect = 7e-42
Identities = 91/184 (49%), Positives = 114/184 (61%), Gaps = 11/184 (5%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EA F V + V GY +PTP+Q P ++ ++L+ AQTGSGKT A++LP I H
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 182 INN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 331
I +PP RR P ALVL+PTRELA QI + A F + S ++ ++GG
Sbjct: 201 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 260
Query: 332 PK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 508
R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRK
Sbjct: 261 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRK 320
Query: 509 IIEQ 520
I+ Q
Sbjct: 321 IVGQ 324
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 166 bits (404), Expect = 7e-42
Identities = 91/184 (49%), Positives = 114/184 (61%), Gaps = 11/184 (5%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EA F V + V GY +PTP+Q P ++ ++L+ AQTGSGKT A++LP I H
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 182 INN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 331
I +PP RR P ALVL+PTRELA QI + A F + S ++ ++GG
Sbjct: 185 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 244
Query: 332 PK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 508
R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRK
Sbjct: 245 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRK 304
Query: 509 IIEQ 520
I+ Q
Sbjct: 305 IVGQ 308
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 166 bits (404), Expect = 7e-42
Identities = 91/184 (49%), Positives = 114/184 (61%), Gaps = 11/184 (5%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EA F V + V GY +PTP+Q P ++ ++L+ AQTGSGKT A++LP I H
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 182 INN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 331
I +PP RR P ALVL+PTRELA QI + A F + S ++ ++GG
Sbjct: 182 ILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGR 241
Query: 332 PK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 508
R+Q L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRK
Sbjct: 242 ENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRK 301
Query: 509 IIEQ 520
I+ Q
Sbjct: 302 IVGQ 305
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 165 bits (402), Expect = 1e-41
Identities = 81/164 (49%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Frame = +2
Query: 41 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD- 214
++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDE 158
Query: 215 ----GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVI 382
P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ GVEIVI
Sbjct: 159 EQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVEIVI 217
Query: 383 ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 514
ATPGRL D G +L TY+VLDEADRMLDMGFE IR+I+
Sbjct: 218 ATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRIL 261
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 152 bits (368), Expect = 2e-37
Identities = 81/181 (44%), Positives = 111/181 (61%), Gaps = 11/181 (6%)
Frame = +2
Query: 2 FEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 178
F E FP + + + K G PT IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++
Sbjct: 191 FLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
Query: 179 HINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAADF-------GHTSYVRNTCVFGG 328
Q P R +GP L++ P+RELA+QI + + G C+ GG
Sbjct: 251 FCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCI-GG 309
Query: 329 APKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRK 508
P EQA+D+ G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE +I+
Sbjct: 310 VPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKS 369
Query: 509 I 511
I
Sbjct: 370 I 370
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 151 bits (366), Expect = 3e-37
Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 12/184 (6%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F + + +++++ +KT GY PTP+Q P G++L+ AQTGSGKT A+++P +
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 182 INNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 328
I P R+ P ALVL+PTREL+ QI + F + + + + ++GG
Sbjct: 228 ILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
Query: 329 APK-REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIR 505
++Q L G I+IATPGRLID +++G ++ C YLVLDEADRMLDMGFEPQIR
Sbjct: 288 RENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIR 347
Query: 506 KIIE 517
+I+E
Sbjct: 348 QIVE 351
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 127 bits (307), Expect = 4e-30
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 182 INNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF P+I +II
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQII 475
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 127 bits (307), Expect = 4e-30
Identities = 68/176 (38%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 182 INNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 360 LILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK 419
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+ +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF P+I +II
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQII 475
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 126 bits (304), Expect = 1e-29
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 182 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIV 518
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 126 bits (304), Expect = 1e-29
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 182 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIV 518
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 126 bits (304), Expect = 1e-29
Identities = 67/176 (38%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 182 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNK 462
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 463 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIV 518
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 122 bits (294), Expect = 2e-28
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 182 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIV 729
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 122 bits (294), Expect = 2e-28
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 182 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIV 729
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 122 bits (294), Expect = 2e-28
Identities = 65/176 (36%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 182 INNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 349
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNK 673
Query: 350 RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII 514
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 674 GQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIV 729
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 116 bits (280), Expect = 8e-27
Identities = 58/164 (35%), Positives = 98/164 (59%)
Frame = +2
Query: 29 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 208
V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A+++P + + R
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RD 90
Query: 209 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 388
G AL+++PTRELA Q +V + G + +R C+ GG EQ + +I++AT
Sbjct: 91 TTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
Query: 389 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 520
PGRL+ + + L Y+V DEADR+ +MGF+ Q+ + +++
Sbjct: 151 PGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKR 194
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 116 bits (280), Expect = 8e-27
Identities = 58/164 (35%), Positives = 98/164 (59%)
Frame = +2
Query: 29 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 208
V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A+++P + + R
Sbjct: 35 VYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKR----RD 90
Query: 209 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIAT 388
G AL+++PTRELA Q +V + G + +R C+ GG EQ + +I++AT
Sbjct: 91 TTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
Query: 389 PGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 520
PGRL+ + + L Y+V DEADR+ +MGF+ Q+ + +++
Sbjct: 151 PGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKR 194
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 113 bits (271), Expect = 1e-25
Identities = 59/170 (34%), Positives = 97/170 (57%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R LE
Sbjct: 91 IDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 362 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
G+ +V+ TPGR+ D + + + R VLDEAD ML GF+ QI ++
Sbjct: 146 AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEV 195
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 113 bits (271), Expect = 1e-25
Identities = 59/170 (34%), Positives = 97/170 (57%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R LE
Sbjct: 91 IDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 362 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
G+ +V+ TPGR+ D + + + R VLDEAD ML GF+ QI ++
Sbjct: 146 AGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEV 195
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 111 bits (266), Expect = 4e-25
Identities = 66/174 (37%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
+ + P LVL PTRELA QI Q G + + GG QA L
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 362 RGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE 517
R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M FE ++ KI++
Sbjct: 161 RRPHIIVATPGRLVDHLENTKG-FNLKALKFLIMDEADRILNMDFEVELDKILK 213
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 110 bits (265), Expect = 5e-25
Identities = 57/159 (35%), Positives = 93/159 (58%)
Frame = +2
Query: 38 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 217
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 218 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 397
A+V+ PTRELA Q Q+ + ++ GG R+ L V +VIATPGR
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGR 171
Query: 398 LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 514
++D +EKG ++ C LVLDEAD++L F+ + ++I
Sbjct: 172 ILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLI 210
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 109 bits (263), Expect = 9e-25
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 362 RGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQIRKIIE 517
+V+ATPGRL D +E + ++ + VLDEADRML+ + Q++ I E
Sbjct: 206 ERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFE 261
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 109 bits (263), Expect = 9e-25
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 362 RGVEIVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQIRKIIE 517
+V+ATPGRL D +E + ++ + VLDEADRML+ + Q++ I E
Sbjct: 206 ERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFE 261
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 107 bits (257), Expect = 5e-24
Identities = 58/161 (36%), Positives = 102/161 (63%), Gaps = 1/161 (0%)
Frame = +2
Query: 35 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 214
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 215 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 394
G ++++PTREL+ Q V ++ S + V GG+ + + L +GV I++ATPG
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPG 199
Query: 395 RLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFEPQIRKII 514
RL+D L+ L R L++DEADR+LD+GFE ++++++
Sbjct: 200 RLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVL 240
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 101 bits (241), Expect = 4e-22
Identities = 55/170 (32%), Positives = 92/170 (54%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + + +
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
++ Q +R AL+L+PTRELA QIQ+V G V+ GG E R L+
Sbjct: 88 LDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLD 142
Query: 362 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
G +V TPGR+ D + + + LVLDEAD ML+ GF+ Q+ I
Sbjct: 143 YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDI 192
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 101 bits (241), Expect = 4e-22
Identities = 55/170 (32%), Positives = 92/170 (54%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + + +
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
++ Q +R AL+L+PTRELA QIQ+V G V+ GG E R L+
Sbjct: 88 LDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLD 142
Query: 362 RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
G +V TPGR+ D + + + LVLDEAD ML+ GF+ Q+ I
Sbjct: 143 YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDI 192
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 99.5 bits (237), Expect = 1e-21
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Frame = +2
Query: 20 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 184
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 185 NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE- 361
++ P L++APTREL Q A + + ++ FGG + + L
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Query: 362 -RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKII 514
+ I++AT GRL DF+ G +L + Y+VLDEADRM+D F ++ KII
Sbjct: 864 FSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKII 916
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 99.5 bits (237), Expect = 1e-21
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Frame = +2
Query: 20 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 184
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 185 NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE- 361
++ P L++APTREL Q A + + ++ FGG + + L
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRS 863
Query: 362 -RGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKII 514
+ I++AT GRL DF+ G +L + Y+VLDEADRM+D F ++ KII
Sbjct: 864 FSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKII 916
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 95.9 bits (228), Expect = 2e-20
Identities = 60/161 (37%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Frame = +2
Query: 35 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 214
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 215 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 394
G AL+++PTRELA Q G V GG+ + R+ G+ I++ TPG
Sbjct: 148 GLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTPG 206
Query: 395 RLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 514
RL+ + E + LVLDEADRMLDMGF Q+ II
Sbjct: 207 RLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSII 247
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 94.7 bits (225), Expect = 4e-20
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Frame = +2
Query: 29 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 193
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 194 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 373
R+ DGP+AL+LAPTRELA QI + + + + +G + + ++ G +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCD 511
Query: 374 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP 496
I+I T GR++DF K +L +LV DEADR+L DM +P
Sbjct: 512 ILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDP 553
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 93.9 bits (223), Expect = 6e-20
Identities = 67/196 (34%), Positives = 95/196 (48%), Gaps = 25/196 (12%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
+ +P + LVL PTRELA Q+ QV + GG + Q L
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 362 RGVEIVIATPGRLIDFLEKG-------------TTNL-------QRC-----TYLVLDEA 466
G ++V+ATPGRLID L T N+ + C LVLDEA
Sbjct: 268 SGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEA 327
Query: 467 DRMLDMGFEPQIRKII 514
DRML+ F Q+ ++I
Sbjct: 328 DRMLEEAFRDQMNELI 343
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 91.1 bits (216), Expect = 4e-19
Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 13/180 (7%)
Frame = +2
Query: 20 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 184
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 185 --NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 358
+ + GP AL++APTREL QI + T+ + T + GG + +Q R +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERII 282
Query: 359 -ERGVEIVIATPGRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 520
++ +IV+ATPGRL +++ T + LV+DE DRM++ G+ ++ I+ +
Sbjct: 283 SQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNK 342
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 86.6 bits (205), Expect = 9e-18
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 362 RG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 514
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D F I II
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIII 189
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 86.6 bits (205), Expect = 9e-18
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
+++ R +++ PTRE++ QI++ T R + GG+ + DL+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLK 137
Query: 362 RG-VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII 514
+ +IVI TPGR+ ++ G N+ + VLDEAD+++D F I II
Sbjct: 138 QTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIII 189
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 85.0 bits (201), Expect = 3e-17
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 182 INNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 358
+ + G GP A+++APT+EL QI ++ + E + L
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWL 210
Query: 359 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
E +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI
Sbjct: 211 EDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI 261
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 81.4 bits (192), Expect = 4e-16
Identities = 54/168 (32%), Positives = 93/168 (55%), Gaps = 13/168 (7%)
Frame = +2
Query: 56 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 214
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 215 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL-ERGVEIVIATP 391
GP AL++APTREL QI + T+ + T + GG + +Q R + ++ +IV+ATP
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATP 127
Query: 392 GRLIDFLEKGTT-----NLQRCTYLVLDEADRMLDMGFEPQIRKIIEQ 520
GRL +++ T + LV+DE DRM++ G+ ++ I+ +
Sbjct: 128 GRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNK 175
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 76.6 bits (180), Expect = 1e-14
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 181
F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP +
Sbjct: 13 FREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRM 70
Query: 182 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 361
I N G AL+L+P+REL QI V F + V GG + + +
Sbjct: 71 IQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFK 128
Query: 362 -RGVEIVIATPGRLIDFLEKGTTNLQR----CTYLVLDEADRMLDMGFEPQIRKII 514
+ V I++ATPGRL ++ T + R LV+DEADR ++ FE +R+I+
Sbjct: 129 NKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREIL 184
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 73.3 bits (172), Expect = 9e-14
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Frame = +2
Query: 29 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 208
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 209 GDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 379
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 380 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKIIE 517
+ TPGR++ G L + Y VLDE D+M+ D +++I++
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVK 212
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 73.3 bits (172), Expect = 9e-14
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Frame = +2
Query: 29 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 208
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 52 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 106
Query: 209 GDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 379
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 107 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 165
Query: 380 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKIIE 517
+ TPGR++ G L + Y VLDE D+M+ D +++I++
Sbjct: 166 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVK 212
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 71.7 bits (168), Expect = 3e-13
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +2
Query: 29 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 208
+ + + G++ P+ +Q + P A+ G ++V A++G GKT +++ + + P+
Sbjct: 51 ILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLE---PV-- 105
Query: 209 GDGPIALV-LAPTRELAQQIQQVAADFG-HTSYVRNTCVFGG-APKREQARDLERGVEIV 379
DG +++V + TRELA QI + F + V+ FGG A K+++ R IV
Sbjct: 106 -DGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIV 164
Query: 380 IATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 478
+ TPGR++ G L + Y VLDE D+M+
Sbjct: 165 VGTPGRMLALARSGKLKLDKVKYFVLDECDKMI 197
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 70.9 bits (166), Expect = 5e-13
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Frame = +2
Query: 59 KEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--I 223
++P+PIQ Q P +N++ A TGSGKTLA+ LP I+ + + + +
Sbjct: 147 RQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLL 206
Query: 224 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 403
A+VL PTRELA Q +F Y NT + E+ D++ +I+++TP R++
Sbjct: 207 AVVLEPTRELA---AQTYTEF--LKYCANTSISAANFSGEET-DIQH-ADILVSTPNRIV 259
Query: 404 DFLEKGTTNLQRCTYLVLDEADRMLDM 484
L+K T+ R +LV+DE+DR+ ++
Sbjct: 260 FHLDKIDTSSLR--WLVVDESDRLFEV 284
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 67.3 bits (157), Expect = 6e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAI 175
F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L +
Sbjct: 211 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 270
Query: 176 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQA 349
I+ P + LAPT ELA+QI +V G + + + GG +
Sbjct: 271 CRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 325
Query: 350 RDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 478
R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 326 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 367
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 67.3 bits (157), Expect = 6e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAI 175
F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L +
Sbjct: 236 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 295
Query: 176 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQA 349
I+ P + LAPT ELA+QI +V G + + + GG +
Sbjct: 296 CRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 350
Query: 350 RDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 478
R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 351 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 392
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 67.3 bits (157), Expect = 6e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 5/164 (3%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYILPAI 175
F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L +
Sbjct: 620 FRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTML 679
Query: 176 VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQA 349
I+ P + LAPT ELA+QI +V G + + + GG +
Sbjct: 680 CRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRG 734
Query: 350 RDLERGVEIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML 478
R L +IVI TPG D+L+K + + LVLDEAD M+
Sbjct: 735 RKLTE--QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMI 776
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 58.8 bits (136), Expect = 2e-09
Identities = 42/159 (26%), Positives = 77/159 (48%)
Frame = +2
Query: 35 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 214
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 215 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPG 394
++LAP R +AQ+ + G V TC+ + + ++ +++ TP
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL-----GFDTTAENDKISHVLMGTPK 118
Query: 395 RLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
DFL ++ R VLDEAD ML GF+ QI ++
Sbjct: 119 ---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEV 154
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Frame = +2
Query: 92 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 271
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 272 VAADFGHTSYVRNTCVFGGAPKRE-QARDLERG-VEIVIATPGRLIDFLEK---GTTNLQ 436
+ S V GA E +AR L +++ATP RL+ L +L
Sbjct: 207 EFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPPPIDLS 266
Query: 437 RCTYLVLDEADRM 475
+ +L++DEADRM
Sbjct: 267 KLRFLIVDEADRM 279
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 54.0 bits (124), Expect = 6e-08
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +2
Query: 167 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 337
P + ++ +P + DG P A+++APT+EL QI ++ +
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINE 136
Query: 338 REQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKI 511
E + LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI
Sbjct: 137 EENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKI 194
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 218 PIALVLAPTRELAQQIQQVAADFGH---TSYVRNTCVFGGAPKREQARDLERGVEIVIAT 388
P+ ++L PTREL QQ Q F + +R + G + R LE G +IV+ T
Sbjct: 282 PLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Query: 389 PGRLIDFLEKGTTNLQRCTYLVLDEADRML 478
P R+ D + G + ++V+DE D+ L
Sbjct: 342 PSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 2 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 169
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 46.0 bits (104), Expect = 2e-05
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 14/163 (8%)
Frame = +2
Query: 74 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAP 241
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 242 TRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARD-------LERG-VEIVIATPG 394
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 79 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 132
Query: 395 RLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQ 520
+L +E G L ++LDEAD+M+D F P I I++Q
Sbjct: 133 KLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQ 175
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 45.2 bits (102), Expect = 3e-05
Identities = 47/163 (28%), Positives = 69/163 (42%), Gaps = 14/163 (8%)
Frame = +2
Query: 74 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRR--GDGPIALVLAP 241
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 242 TRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARD-------LERG-VEIVIATPG 394
T L Q+ F + C+ P R+ D +G +I T G
Sbjct: 179 TSALVDQL------FNRCELILGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIG 232
Query: 395 RLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQ 520
+L +E G L ++LDEAD+M+D F P I I++Q
Sbjct: 233 KLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQ 275
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 40.7 bits (91), Expect = 6e-04
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Frame = +2
Query: 110 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVA 277
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRC 189
Query: 278 ------ADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQR 439
D +R+ + + +D +I T G+L +E T L
Sbjct: 190 EVLLGLIDMEDIIPIRDIKIEKLVASYQFTKD---QCDIAFCTMGKLKASIEDKTILLDN 246
Query: 440 CTYLVLDEADRMLDMG-FEPQIRKIIEQ 520
++LDE+D+M+D+ F I +++Q
Sbjct: 247 LKMMILDESDKMIDIACFGNDIDWVLDQ 274
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +2
Query: 95 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 274
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 275 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 433
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +2
Query: 95 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 274
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 275 AADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNL 433
A+ + +V +T + G+ R++ + ++++ATP +++ + +L
Sbjct: 359 ASISSYLDHVYHTQIIQGS-DNVPTRNVIQSKDLIVATPQMIVNLCNEHRNSL 410
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 35.1 bits (77), Expect = 0.031
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 98 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 277
A+ GKN V VA TGSGKT I A+ HI + +G ++L P L Q +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQQKDRF 439
Query: 278 ADFGHTSYVRNTCVFGGAPKREQA---RDLERGVEIVIATPGRLIDFLEKGTTN 430
+ + Y N F G+ RD + + TP LI+ L+ N
Sbjct: 440 LKYCNGMYEVNG--FHGSESSVSGTGRRDEVIATHVSVMTPQILINMLQSVRQN 491
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 33.5 bits (73), Expect = 0.094
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +2
Query: 53 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 229
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 230 VLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 397
+ P ++A +V AD+ + +T V + + +RG +++I+TP R
Sbjct: 1372 YITPMEDMA---TKVYADWKRRLEPAIGHTIVLLTGEQTMDLKLAQRG-QLIISTPER 1425
Score = 28.3 bits (60), Expect = 3.5
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Frame = +2
Query: 53 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 229
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 471 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNH---LAEDGSVKL 527
Query: 230 ------VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATP 391
+AP + L +Q++ F V + +++ ++++ TP
Sbjct: 528 DEFKIVYIAPMKSL---VQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQVIVCTP 584
Query: 392 GRLIDFLEKGTTNL--QRCTYLVLDEADRMLD 481
+ KG Q L++DE + D
Sbjct: 585 EKYDVVTRKGGERAYNQMVRLLIIDEIHLLHD 616
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 71 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 178
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 71 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 178
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 134 TGSGKTLAYILPAIVH 181
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 267 SKLLQILDTHLMFVTRVCLVVLLKESK 347
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.1 bits (62), Expect = 2.0
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +2
Query: 110 KNLVGVAQTGSGKT-LAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 286
KN + TGSGKT +A +L + P+ +G V+ + QQ +
Sbjct: 27 KNTIVQLGTGSGKTFIAVLLLKEYGVQLFAPLDQGGKRAFFVVEKVNLVEQQAIHIEV-- 84
Query: 287 GHTSY----VRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLV 454
HTS+ V G +EQ + +V+ T L+D + ++ L+
Sbjct: 85 -HTSFKVGQVHGQTSSGLWDSKEQCDQFMKRHHVVVITAQCLLDLIRHAYLKIEDMCVLI 143
Query: 455 LDEADRML 478
DE L
Sbjct: 144 FDECHHAL 151
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 53 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 229
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 230 ------VLAPTRELAQQI 265
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 416 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 505
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 416 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 505
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 375 ISTPLSKSRACSLLGAPPNTHVLRT*DVCPKSAATC 268
++ P + CS P TH + CPK AATC
Sbjct: 366 LNDPSDNVQRCSGKEHCPETHDCKNTVCCPKPAATC 401
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 155 PTFCRNPFGLRQLNSFQT*LSASLELEWASVLCN 54
P CRN F +RQ N + S+ L W V CN
Sbjct: 205 PPPCRNDFSMRQFNPLEDEHLRSMHL-WNHVGCN 237
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 155 PTFCRNPFGLRQLNSFQT*LSASLELEWASVLCN 54
P CRN F +RQ N + S+ L W V CN
Sbjct: 205 PPPCRNDFSMRQFNPLEDEHLRSMHL-WNHVGCN 237
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 332 EHHQTHTCYEHKMCVQNLQQLAEFVVL 252
+HH +HT +H +C+Q + A VL
Sbjct: 27 DHHISHTINQHHLCIQKKRLKAGTTVL 53
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,361,269
Number of Sequences: 27780
Number of extensions: 293318
Number of successful extensions: 975
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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